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SCNpilot_expt_300_bf_scaffold_23211_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 430..1356

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMB3_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 297.0
  • Bit_score: 361
  • Evalue 6.70e-97
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS29584.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 297.0
  • Bit_score: 361
  • Evalue 9.40e-97
deubiquitinase similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 267.0
  • Bit_score: 285
  • Evalue 1.70e-74

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGAGCGTCTCATCGGGCCCGAGGGCGAACCGTGCGCCCTTCCGCGCGGCCTATCACCGCCTGTTTGTCCGCAAACCGGCGGGCAACACGATTCGAACCCAGATCCTGATCTGCTACTTGCTGATGAGCTCCATCACGGCAGCTCTCGGCTTTTATGCCACGTTCGGTATCAAGCATGCCGGCATCCTGGTCGCCAAGACGTTCGACGAATCGCTGATGTCGATCAACTACGCGCGGGCCGCCGCCGTTGACTTCTCCAAGATGCGGGCCGCCGCTTCGCGGAACCTCGCAGCCCGCGATCCGCTCGCTCAAGCCACGCTCGACAAGGAAATCAACGGTCTGGAAAAGACCTTCTACGAGGATTTGAGCGTGGCCGCCGAGCGCGCCCAGTCGCCGCTTGCGACCAACGCGGCCGCCAAGGTGCGCGAGGCCGTCAGTGCCTGGTCGGCGCTGTATCGCAGCGGCAAGAAGGATCTGCTGCCGGACATCGACGGCGGCGCGATCTTCGCGACCCGGCTGGACAACTACGCCAAGACCGTCGACCAGCAGATCGATCTTCTGGTCAACTATACCGCGGGGGACGGTTTTCTGTTTCGGCAACGGGCGCTGTCCACGATCAATCGCGACCTGCAATTCAACGTGGTCGCGCTCGCCGTCGCGCTGCTGCTGTCCGGATTCGTCACCTGGCTGCTGAGCCGCAGGATCATCGGTCCTGTCGCCGTTGCATCGAGGGCCGCCCGCAGCATCGCGGAGGGCAAGCTCGATGTCGACATTCCCAAGGGAGGCGCCGACGAGCTCGGCACGCTGATCGCCGCGATGGGCGTGATGCGCAACAACATCAAGGATATGGTCGAGCGCGAGATCGCGCGCTCGAGACCTCCCGCGAAGGCGTCGTTCTGCTTCATCGCGACGGCAAGATCGCGCTAG
PROTEIN sequence
Length: 309
MSVSSGPRANRAPFRAAYHRLFVRKPAGNTIRTQILICYLLMSSITAALGFYATFGIKHAGILVAKTFDESLMSINYARAAAVDFSKMRAAASRNLAARDPLAQATLDKEINGLEKTFYEDLSVAAERAQSPLATNAAAKVREAVSAWSALYRSGKKDLLPDIDGGAIFATRLDNYAKTVDQQIDLLVNYTAGDGFLFRQRALSTINRDLQFNVVALAVALLLSGFVTWLLSRRIIGPVAVASRAARSIAEGKLDVDIPKGGADELGTLIAAMGVMRNNIKDMVEREIARSRPPAKASFCFIATARSR*