ggKbase home page

SCNpilot_solid_1_scaffold_13_325

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 330317..331396

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T4T1_BURPP similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 362.0
  • Bit_score: 235
  • Evalue 1.10e-58
Cobalt/zinc/cadmium efflux RND transporter similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 349.0
  • Bit_score: 257
  • Evalue 4.50e-66
Cobalt/zinc/cadmium efflux RND transporter {ECO:0000313|EMBL:AIY40884.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 349.0
  • Bit_score: 257
  • Evalue 2.20e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGATTCAGACGAAAGCGCGGGCGCTTTGCGCGGCGGCAGCAACGCTGCTGGCGGTGGGCAGTCTGGCCTGGCCGATGGGCGCACGCGGCCAGACGGCGGATGGCGTGGTGCAGCCGCCCGTGAGCGCGCTGGTCAAGACCGCGCCGCTGCGGCGCCAGGCGCTGGCACGCGAGCTCGCGGTATTGGGCGATGTAGCCACCGGCAAGGTGGAAGGGGTGAACTTCCCGAGCGCCGGACAGGTGGCTCGGCTCCTGGTTTCGCCCGGCCAGCAGGTCCGGCGCGGCACGCCGCTGGTGGTGCTGAGCAGCGATCCGGCCGCCCAGCTCGCTTACACGCAGGCCGGCACGGCGGTCCATTTCGCCCGCGAGGAACTGCGGCGCAACGAGGAGCTGTTTGCGCTGCAGCTGGCCACCAGCGCCCAGGTGGATGCGGCGCGGCGCGCGCTGCGCGACGCCGAGGCCAATCTGGCGGCGCAAGGCAAGCTGGGAGGTGCCACCGCTGAGGCCACGGTCAAGGCGCCGTTTGACGGCGTGGTCACCGCGATTGCCGTGGCCCAGGGCGATCGCGTGCAGCCCGGCGCGCAGATCCTGCAGCTGGGGCGCGCCGAAGCGCTGCGCGTGATGCTCGGCATCGAACCCGACGAGCGGCCGCTGGTGCGTGCCGGCCTGCCGGTCGTCATCACCACGCTGCAGGAGGGCGGCCCCAGCGCCCGCGGGACGGTGGCGCTGGTGCAGGACATCGTGGACGCCAAGAGCCGCCTGGTGGGCGTGGCGGTGACCGTGCCGCGCGCACCCTCAACCAGCTTCCTGATTCCCGGCATGCACGTGCGTGCCAGCATCGAACTGGGCAAGACCGAGGCCTGGGTGGTGCCGCGCGATGCGGTGCTGACCGATGCCAGCGGCGCCTACCTCTACCAGGTGGCCGGCGGCAAGGCGCGGCGTGCGGCGGTGAGGGTAGCGCAGCAAACCGGCGCGGCGGTGGCGGTCGAGGGCGAGGCGCTTGACGCCGGGCAGCCGGTGGTGGTGCTGGGCAACTATGAGCTGCAGGACGGCATGCCGGTGCGGGAGGGCGGTCAATGA
PROTEIN sequence
Length: 360
MIQTKARALCAAAATLLAVGSLAWPMGARGQTADGVVQPPVSALVKTAPLRRQALARELAVLGDVATGKVEGVNFPSAGQVARLLVSPGQQVRRGTPLVVLSSDPAAQLAYTQAGTAVHFAREELRRNEELFALQLATSAQVDAARRALRDAEANLAAQGKLGGATAEATVKAPFDGVVTAIAVAQGDRVQPGAQILQLGRAEALRVMLGIEPDERPLVRAGLPVVITTLQEGGPSARGTVALVQDIVDAKSRLVGVAVTVPRAPSTSFLIPGMHVRASIELGKTEAWVVPRDAVLTDASGAYLYQVAGGKARRAAVRVAQQTGAAVAVEGEALDAGQPVVVLGNYELQDGMPVREGGQ*