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SCNpilot_solid_1_scaffold_43

Search features with annotation key words

Displaying items 121-150 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_43_121
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(128208..128624)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JLG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC90881.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_solid_1_scaffold_43_122
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

128772..129545
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371AAA1
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIC96337.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter so
Enoyl-CoA hydratase/isomerase
SCNpilot_solid_1_scaffold_43_123
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(129701..131014)
DNA (1314bp) protein (438aa)
High-affinity H+/gluconate symporter n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEY1_9SPHI rbh
High-affinity H+/gluconate symporter {ECO:0000313|EMBL:EDM36052.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedo
gluconate transporter
SCNpilot_solid_1_scaffold_43_124
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131234..131578)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624B8D
Uncharacterized protein {ECO:0000313|EMBL:KIC95280.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_43_125
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131778..133061)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacterii
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
SCNpilot_solid_1_scaffold_43_126
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

133175..134071
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AD9F2 rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AKD04189.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_solid_1_scaffold_43_127
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134271..135710)
DNA (1440bp) protein (480aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophaga
RNA-splicing ligase RtcB n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ8_9SPHI rbh
protein rtcB
SCNpilot_solid_1_scaffold_43_128
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(135864..136943)
DNA (1080bp) protein (360aa)
Nucleotidyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGF5_FLUTR rbh
Nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AEA42561.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strai
SCNpilot_solid_1_scaffold_43_129
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136924..137682)
DNA (759bp) protein (253aa)
Predicted nucleotidyltransferase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BEJ2_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:GAK97211.1}; TaxID=319236 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
nucleotidyltransferase
SCNpilot_solid_1_scaffold_43_130
unknown

Not on your lists

comp(137692..138888)
DNA (1197bp) protein (399aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_43_131
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138984..140087)
DNA (1104bp) protein (368aa)
Band 7 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK24_NIAKG
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:AEW02962.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DS
SCNpilot_solid_1_scaffold_43_132
unknown

Not on your lists

140155..140301
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_43_133
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141047..141532)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK22_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02960.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_43_trna_5
unknown

Not on your lists

comp(141570..141641)
DNA (72bp)
transferRNA
SCNpilot_solid_1_scaffold_43_trna_4
unknown

Not on your lists

comp(141646..141716)
DNA (71bp)
transferRNA
SCNpilot_solid_1_scaffold_43_trna_3
unknown

Not on your lists

comp(141741..141813)
DNA (73bp)
transferRNA
SCNpilot_solid_1_scaffold_43_trna_2
unknown

Not on your lists

comp(141820..141892)
DNA (73bp)
transferRNA
SCNpilot_solid_1_scaffold_43_trna_1
unknown

Not on your lists

comp(141898..141969)
DNA (72bp)
transferRNA
SCNpilot_solid_1_scaffold_43_134
unknown

Not on your lists

comp(142040..142201)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_43_135
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

142612..143544
DNA (933bp) protein (311aa)
SNF2-related protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQF8_EMTOG
SNF2-related protein
SNF2-related protein {ECO:0000313|EMBL:AFK01911.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 174
SCNpilot_solid_1_scaffold_43_136
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(143597..144433)
DNA (837bp) protein (279aa)
Putative uncharacterized protein id=3530403 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
SCNpilot_solid_1_scaffold_43_137
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(144518..145288)
DNA (771bp) protein (257aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037383DE
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:KGL59761.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polarib
SCNpilot_solid_1_scaffold_43_138
unknown

Not on your lists

comp(145584..145712)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_43_139
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

145758..147242
DNA (1485bp) protein (495aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
RNA polymerase, sigma 54 subunit, RpoN/SigL
SCNpilot_solid_1_scaffold_43_140
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

147239..147898
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036636E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02462.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_43_141
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147935..148228)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF49_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02669.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_43_142
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148291..148719)
DNA (429bp) protein (143aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF50_NIAKG
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEW02670.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.
SCNpilot_solid_1_scaffold_43_143
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148835..149857)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; S
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP50_NIAKG
Holliday junction DNA helicase subunit RuvB
SCNpilot_solid_1_scaffold_43_144
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149875..150291)
DNA (417bp) protein (139aa)
Ferric uptake regulator, Fur family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEW02528.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;
SCNpilot_solid_1_scaffold_43_145
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150350..150964)
DNA (615bp) protein (205aa)
Electron transport protein SCO1/SenC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI9_NIAKG
Electron transporter SenC {ECO:0000313|EMBL:KIC96536.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
electron transport protein SCO1/SenC
Displaying items 121-150 of 154 in total

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