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SCNpilot_solid_1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_85_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..714
DNA (714bp) protein (238aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003783020
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SCNpilot_solid_1_scaffold_85_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

909..1355
DNA (447bp) protein (149aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI000361A4CD
deoxyuridine 5'-triphosphate nucleotidohydrolase
SCNpilot_solid_1_scaffold_85_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1374..2186
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQH2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41630.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2134..3552
DNA (1419bp) protein (473aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQH3_NIAKG
Peptidase M23 family protein {ECO:0000313|EMBL:GAO41629.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
peptidase M23
SCNpilot_solid_1_scaffold_85_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3732..5030
DNA (1299bp) protein (433aa)
WD40-like beta Propeller containing protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5A3_PEDSD rbh
hypothetical protein rbh
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:ADY52048.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae;
SCNpilot_solid_1_scaffold_85_6
unknown

Not on your lists

5438..6229
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_85_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6231..6776)
DNA (546bp) protein (182aa)
DNA-3-methyladenine glycosylase I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THQ3_NIAKG
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KIC95935.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavih
DNA-3-methyladenine glycosylase I
SCNpilot_solid_1_scaffold_85_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6927..7340)
DNA (414bp) protein (138aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAR3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42167.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
stress responsive protein
SCNpilot_solid_1_scaffold_85_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7360..8529)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC15A rbh
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEI48661.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slith
SCNpilot_solid_1_scaffold_85_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9028..9633)
DNA (606bp) protein (202aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN5_NIAKG
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEW02888.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
SCNpilot_solid_1_scaffold_85_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9911..10507)
DNA (597bp) protein (199aa)
Regulatory protein MerR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK1_NIAKG
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:AEW01989.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_85_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10559..11566)
DNA (1008bp) protein (336aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH2_NIAKG
Peptidase M23 {ECO:0000313|EMBL:KIC96078.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilv
peptidase M23
SCNpilot_solid_1_scaffold_85_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


11667..14306
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSL2_9SPHI
alanyl-tRNA synthetase
SCNpilot_solid_1_scaffold_85_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14558..15031
DNA (474bp) protein (158aa)
ferritin Dps family protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003745098
Putative DNA-binding protein {ECO:0000313|EMBL:GAO43943.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
ferritin Dps family protein
SCNpilot_solid_1_scaffold_85_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15308..17290
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035DBEEA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC96243.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17394..18737
DNA (1344bp) protein (448aa)
Amino acid permease-associated region n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYJ8_HALH1 rbh
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:AEE50404.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="H
SCNpilot_solid_1_scaffold_85_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18742..19902
DNA (1161bp) protein (387aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:AEW03066.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AEW03066.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
Cystathionine beta-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP5_NIAKG rbh
Cystathionine beta-lyase rbh
SCNpilot_solid_1_scaffold_85_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20007..21467
DNA (1461bp) protein (487aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP6_NIAKG
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:GAO45134.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" so
outer membrane efflux protein
SCNpilot_solid_1_scaffold_85_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21485..22891
DNA (1407bp) protein (469aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP7_NIAKG rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEW03068.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Nia
SCNpilot_solid_1_scaffold_85_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22896..23966
DNA (1071bp) protein (357aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
Glycerol-3-phosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP8_NIAKG
glycerol-3-phosphate dehydrogenase
SCNpilot_solid_1_scaffold_85_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23970..24584)
DNA (615bp) protein (205aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94853.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
HAD-superfamily hydrolase
SCNpilot_solid_1_scaffold_85_22
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24825..25199
DNA (375bp) protein (125aa)
glyoxalase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034CEA2F
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78906.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="P
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_solid_1_scaffold_85_23
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25238..25873)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JNF1_9BACT
hypothetical protein Tax=RBG_13_Bacteroidetes_43_22_curated
hypothetical protein
SCNpilot_solid_1_scaffold_85_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25953..26798
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4M9_DYAFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT95853.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
SCNpilot_solid_1_scaffold_85_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26825..28324)
DNA (1500bp) protein (500aa)
N-acetylglucosamine-6-sulfatase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHD2_RUNSL rbh
Acetylglucosamine-6-sulfatase {ECO:0000313|EMBL:KIC95819.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
N-acetylglucosamine-6-sulfatase rbh
SCNpilot_solid_1_scaffold_85_26
unknown

Not on your lists

comp(28439..28549)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_85_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28605..29273)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788ED8
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:KIC94822.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
GDSL family lipase
SCNpilot_solid_1_scaffold_85_28
unknown

Not on your lists

comp(29759..29851)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_85_29
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(29991..31154)
DNA (1164bp) protein (388aa)
Putative oxidoreductase sll0816 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT56_9BACT
Oxidoreductase {ECO:0000313|EMBL:KIF31612.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
oxidoreductase domain-containing protein
SCNpilot_solid_1_scaffold_85_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31303..32676)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037822AF rbh
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KIC94826.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
hypothetical protein
Displaying items 1-30 of 91 in total

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