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SCNpilot_solid_1_scaffold_211

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_211_30
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32411..33991)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7X4N4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR71053.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
SCNpilot_solid_1_scaffold_211_31
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34019..37309)
DNA (3291bp) protein (1097aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VNU9_9BACT rbh
TonB-dependent receptor {ECO:0000313|EMBL:EPR71052.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_211_32
unknown

Not on your lists

comp(37371..37502)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_211_33
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37668..38300
DNA (633bp) protein (211aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VLG2_9BACT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EPR71050.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium
RNA polymerase sigma-70 factor
SCNpilot_solid_1_scaffold_211_34
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38359..40056)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362D28D
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17015.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_211_35
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40195..41091)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C9_NIAKG rbh
dihydrodipicolinate synthase
SCNpilot_solid_1_scaffold_211_36
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(41193..42173)
DNA (981bp) protein (327aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
acetyl-CoA carboxylase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI0003723458
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
SCNpilot_solid_1_scaffold_211_37
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42442..43680)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97340.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_211_38
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44051..46696)
DNA (2646bp) protein (882aa)
molecular chaperone ClpB n=1 Tax=Segetibacter koreensis RepID=UPI00035EE016 rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
ATP-dependent chaperone ClpB rbh
SCNpilot_solid_1_scaffold_211_39
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46780..47832
DNA (1053bp) protein (351aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD9_NIAKG rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEV97349.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella k
SCNpilot_solid_1_scaffold_211_40
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47981..49402)
DNA (1422bp) protein (474aa)
Putative aminopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPU9_SOLCM
Contig_60, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16545.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F
peptidase M28
SCNpilot_solid_1_scaffold_211_41
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49448..50197)
DNA (750bp) protein (250aa)
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8M4_NIAKG rbh
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW00196.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
SCNpilot_solid_1_scaffold_211_42
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50344..51333
DNA (990bp) protein (330aa)
pyruvate dehydrogenase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI000361BF63
transketolase
Transketolase central region {ECO:0000313|EMBL:ACU63845.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
SCNpilot_solid_1_scaffold_211_43
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

51414..53495
DNA (2082bp) protein (694aa)
TonB-dependent receptor n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ETZ1_EMTOG rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AFK03144.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotr
SCNpilot_solid_1_scaffold_211_44
unknown

Not on your lists

comp(53499..53645)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_211_45
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53934..55097
DNA (1164bp) protein (388aa)
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W5_NIAKG rbh
putative two component sigma-54 specific transcriptional regulator
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:AEV97968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
SCNpilot_solid_1_scaffold_211_46
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55106..55762
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P119_9SPHI
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AIM37225.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacter
SCNpilot_solid_1_scaffold_211_47
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

55898..57394
DNA (1497bp) protein (499aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372AFB6 rbh
signal peptidase I
SCNpilot_solid_1_scaffold_211_48
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57446..57934
DNA (489bp) protein (163aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJS9_CHIPD
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACU63839.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinopha
SCNpilot_solid_1_scaffold_211_49
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(58056..59699)
DNA (1644bp) protein (548aa)
Amino acid permease-associated region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU36_DYAFD rbh
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ACT94804.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermenta
SCNpilot_solid_1_scaffold_211_50
Blattabacterium sp. (Panesthia angustipennis spadica), Blattabacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

59913..61265
DNA (1353bp) protein (451aa)
Glutamate/aspartate:proton symporter n=1 Tax=Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA RepID=M5ADF3_9FLAO
gltP; glutamate/aspartate:proton symporter
Glutamate/aspartate:proton symporter {ECO:0000313|EMBL:BAM99579.1}; TaxID=1229512 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Blattabacteriaceae; Blattabacterium.;" source="Bla
SCNpilot_solid_1_scaffold_211_51
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61382..62353
DNA (972bp) protein (324aa)
SNARE associated Golgi protein-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP89_NIAKG rbh
DedA family protein {ECO:0000313|EMBL:GAO42923.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter pe
hypothetical protein
SCNpilot_solid_1_scaffold_211_52
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62365..63591
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB4B2
MFS transporter {ECO:0000313|EMBL:KIC93192.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisi
MFS transporter
SCNpilot_solid_1_scaffold_211_53
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

63821..64813
DNA (993bp) protein (331aa)
Glycosyl transferase family 9 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP91_NIAKG
glycosyl transferase family protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
glycosyl transferase family protein
Displaying items 31-54 of 54 in total

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