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SCNpilot_solid_1_scaffold_1156

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1156_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(115..834)
DNA (720bp) protein (240aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PET6_CHIPD rbh
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACU57908.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" s
SCNpilot_solid_1_scaffold_1156_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1131..2138)
DNA (1008bp) protein (336aa)
GTPase Obg n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA51_NIAKG rbh
GTPase ObgE rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinopha
SCNpilot_solid_1_scaffold_1156_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2548..4806
DNA (2259bp) protein (753aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CFJ8_SPHS2
Glucosylglycerol-phosphate synthase {ECO:0000313|EMBL:KIC90917.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
HAD superfamily hydrolase
SCNpilot_solid_1_scaffold_1156_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4814..5239)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036766D6
Thioesterase {ECO:0000313|EMBL:KIC95243.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilva
hypothetical protein
SCNpilot_solid_1_scaffold_1156_5
unknown

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5820..6446
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1156_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(6507..8309)
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364054A rbh
long-chain-fatty-acid--CoA ligase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
AMP-dependent synthetase
SCNpilot_solid_1_scaffold_1156_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8371..9384)
DNA (1014bp) protein (338aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW0_NIAKG
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEW02045.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sou
SCNpilot_solid_1_scaffold_1156_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9493..10719)
DNA (1227bp) protein (409aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV9_NIAKG rbh
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
SCNpilot_solid_1_scaffold_1156_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10745..11812)
DNA (1068bp) protein (356aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1220
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB96E rbh
phosphoserine aminotransferase apoenzyme
SCNpilot_solid_1_scaffold_1156_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11884..12855)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02042.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_1156_11
unknown

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13218..13340
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1156_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13372..14184)
DNA (813bp) protein (271aa)
PhnA protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAK8_NIAKG
PhnA protein
PhnA protein {ECO:0000313|EMBL:AEV98170.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM
SCNpilot_solid_1_scaffold_1156_13
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14197..14577)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BX06_HYPNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI78411.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas neptunium
SCNpilot_solid_1_scaffold_1156_14
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14606..15247)
DNA (642bp) protein (214aa)
Putative satD protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BX07_HYPNA
putative satD protein
Putative satD protein {ECO:0000313|EMBL:ABI75922.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas neptunium (
SCNpilot_solid_1_scaffold_1156_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15579..16211)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02041.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_1156_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16552..17166
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
TetR family transcriptional regulator
SCNpilot_solid_1_scaffold_1156_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17250..18605
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381971F rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02039.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sour
SCNpilot_solid_1_scaffold_1156_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18630..19820
DNA (1191bp) protein (397aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV3_NIAKG
RND transporter {ECO:0000313|EMBL:KIC89731.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG
RND family efflux transporter MFP subunit
Displaying 18 items

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