ggKbase home page

SCNpilot_solid_1_scaffold_1200

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1200_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

463..3312
DNA (2850bp) protein (950aa)
DNA polymerase I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH4_NIAKG rbh
DNA polymerase I {ECO:0000313|EMBL:KIC91017.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. Z
DNA polymerase I
SCNpilot_solid_1_scaffold_1200_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3458..4624)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C9823
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACU57939.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (stra
SCNpilot_solid_1_scaffold_1200_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4794..5861
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NRH1_9SPHI rbh
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Ch
SCNpilot_solid_1_scaffold_1200_4
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6008..7075
DNA (1068bp) protein (356aa)
NAD-dependent epimerase/dehydratase (EC:5.1.3.12)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADV47241.1}; EC=5.1.3.12 {ECO:0000313|EMBL:ADV47241.1};; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
NAD-dependent epimerase/dehydratase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X2V8_NITSE rbh
SCNpilot_solid_1_scaffold_1200_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7429..7899
DNA (471bp) protein (157aa)
Ribosome maturation factor RimP n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W8_NIAKG
Ribosome maturation factor rimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
SCNpilot_solid_1_scaffold_1200_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7959..9206
DNA (1248bp) protein (416aa)
NusA antitermination factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W7_NIAKG
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavih
NusA antitermination factor
SCNpilot_solid_1_scaffold_1200_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9264..12221
DNA (2958bp) protein (986aa)
Translation initiation factor IF-2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NR38_9SPHI rbh
translation initiation factor 2 (bIF-2); K02519 translation initiation factor IF-2 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
translation initiation factor IF-2
SCNpilot_solid_1_scaffold_1200_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12301..13674
DNA (1374bp) protein (458aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophag
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788883
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_solid_1_scaffold_1200_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13678..14700)
DNA (1023bp) protein (341aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinop
tRNA-dihydrouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ5_NIAKG rbh
tRNA-U20-dihydrouridine synthase
SCNpilot_solid_1_scaffold_1200_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14859..15806
DNA (948bp) protein (316aa)
Abortive infection protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV65_9SPHI
Abortive infection protein; K07052 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_1200_11
unknown

Not on your lists

15829..15924
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1200_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15921..16793
DNA (873bp) protein (291aa)
Phosphatidate cytidylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ7_NIAKG
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AEW02843.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
SCNpilot_solid_1_scaffold_1200_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16855..17523
DNA (669bp) protein (223aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacte
Phosphatidylserine decarboxylase related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ2_NIAKG
phosphatidylserine decarboxylase
SCNpilot_solid_1_scaffold_1200_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17655..18350)
DNA (696bp) protein (232aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ3_NIAKG rbh
HAD superfamily hydrolase
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 {ECO:0000313|EMBL:AEW02846.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" s
SCNpilot_solid_1_scaffold_1200_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18481..19182
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ4_NIAKG rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEW02847.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niast
Displaying 15 items

View Taxonomy