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SCNpilot_solid_1_scaffold_49_28

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 41607..42197

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 168
  • Evalue 9.10e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 168
  • Evalue 2.50e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 168
  • Evalue 1.30e-38

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
TTGCCGGTTGCTTGTTCAAATAATGAAAAAGATTTGCTGCTTCGCATTTCCAAAGACGATGCATCGGCATTCGCTGTTCTTTTTAATTTGTATAAAGACAAAATTTATACTATCGCCATTAAATTAACCGGGTCAGCTTTTAAAGCGGAAGAAGTGGTGCAGGAGATATTCATGAAATTGTGGGTAAAACGAAAGGAACTTCCTGAAATAGAACATTTTACTGCGTGGTTCTATACCATAACCCGTAATCATCTTTTTTCTTTAATCAAACGTAAGGCTGCCCGCGAAAAGAGAGAGATTGTGTTTGCAGAGAGACTACCTTCTTTTTATAATAATAGCGATGAAAAAGTGCTCCTTAAGGAAACGGAAGCGCTTTTGGAAAAAGCGCTTTATCAATTGCCCCCGCAGCAAAACAAAATATACCGGCTTATTAAAGAACGCGGAATGAAGAAAGAGCAAGTCGCTGTCGAACTAAAGCTTTCAACTGAAACCGTTAAAGTACATCTTGCCAGGGCAATCAAAAATATCCGCAATTATTGTCTCGGTCAAATGAATAATCCGCTTATATGGGTATCTATCTTCTTTTTTTAA
PROTEIN sequence
Length: 197
LPVACSNNEKDLLLRISKDDASAFAVLFNLYKDKIYTIAIKLTGSAFKAEEVVQEIFMKLWVKRKELPEIEHFTAWFYTITRNHLFSLIKRKAAREKREIVFAERLPSFYNNSDEKVLLKETEALLEKALYQLPPQQNKIYRLIKERGMKKEQVAVELKLSTETVKVHLARAIKNIRNYCLGQMNNPLIWVSIFFF*