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SCNpilot_solid_1_scaffold_1_248

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 240911..242311

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU67_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 457.0
  • Bit_score: 586
  • Evalue 1.90e-164
  • rbh
Type II/IV secretion system secretin RcpA/CpaC similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 466.0
  • Bit_score: 719
  • Evalue 5.40e-205
  • rbh
Type II/IV secretion system secretin RcpA/CpaC {ECO:0000313|EMBL:CDM24376.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 466.0
  • Bit_score: 719
  • Evalue 2.70e-204

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAGCCGCCCTTGCCGGTTCTGGCGCATCCTTTCTCTGTGCGGCCTGCTATGGGCGCCCGTCTGCCCGGGGGCCGACGCGGCGGCCGCGTCCGAAACGCAGATCTCCCTGCAGGCGGGCGAGGTGCGCGTGCTGGGCATCCCCGGCGTGGCTCGCGTGGCGGTGGGCGACGGCCAGATCGTCAATGCTGTCAGCACCGATGACCGGGAAGTCATCCTGTTCGCCCGCAAGCCCGGTTTCAGCACCCTGCATGCCTGGACGGCGGATGGCCAGGTGTCCCGCTATGCCGTCGAGGTCGCCCCGGAAGGCGCCCGCCAGCTGCGGGATGAGTTGCGCGCCGTGCTGGAGCGCATCCCCGGCGCCCGGATCACCTCGCTGGGCGACAAGCTGCTGATCGAGGGCGACGAACTGTCCGACGCGGACCGGCAGCGCCTGGCCGAACTGGGCCGCCGGTATCCGCAGCTGCTGGATTTCACCGGGGCCGTGGGCTGGGACCAGATGGTGCTGCTGGACGTCCAGGTGGTCGAGGTGCCCAAGACCCTGATGCGGGAATTGGGCCTGCGCTGGGACCCGCAGAGCGCGGGCGGCCTGACGGCCGGGGCCGGCTGGGATGGCGGTTCGCGGCGCTTTGCCGATCGCCCCGGGGAATCCGTGCTGCCGCTGGTGTTCCCGGCGGCCCGGGCGGCCGGATACTTCGGTTTGAATGCGCTACTGTCCGCGCGGCTCAATCTCCTGGCCCAGGACGGACGGGCCGTCGTGCTGGCGCAGCCTCAACTGCTGGCCCGCAGCGGAGCGACGGCCGAGTTCCTGGCGGGGGGCGAAGTTCCCTACAGCACCGTGGATCGCAATGGCAACACCCAGACGGCGTTCAAGCCGTATGGGGTGTCGCTGCGCATCACCCCGTCCGTGGAACGCAGCGGCGCGGTGCGTTCCCGGATCGAGGTCGAGGTCAGCTCCATCGACACGGCGCTGTCGGTGCCGGGCGGGCCTTCCCTCAAGACGCGGCGCACCGCGACGGAGTTCAACGTCCGCTCGGGGCAGACGCTGGTGCTGGCCGGGTTCCTGTCCCGGGACACGGCCGACAATGTGGATCGCGTGCCGGGCCTGGGTTCGCTGCCCGTGCTGGGCGCGCTGTTCAAGTCCACCCGATTCCAGCGCAATGAAACGGAATTGGCCATTCTGGTGACGCCGCAACTGGTGACGGCGGCTCATCCCGACGTGCGTACCCGCGTGGGGCGCGCGGCTGCCGTGCTGCGCCAGGCGTTTCCCCAGGCGCCCGGCTTGATGAACCCGATCCGCTCCAGCGATGCGGTGCGCGAACCGGTGGAACCCCGTGGCTGGAATCCCCGGGCGGGCGGCCCGGGTTCTCAATGGCGGACGGGCCAGGGAGAGCAGCCATGA
PROTEIN sequence
Length: 467
MSRPCRFWRILSLCGLLWAPVCPGADAAAASETQISLQAGEVRVLGIPGVARVAVGDGQIVNAVSTDDREVILFARKPGFSTLHAWTADGQVSRYAVEVAPEGARQLRDELRAVLERIPGARITSLGDKLLIEGDELSDADRQRLAELGRRYPQLLDFTGAVGWDQMVLLDVQVVEVPKTLMRELGLRWDPQSAGGLTAGAGWDGGSRRFADRPGESVLPLVFPAARAAGYFGLNALLSARLNLLAQDGRAVVLAQPQLLARSGATAEFLAGGEVPYSTVDRNGNTQTAFKPYGVSLRITPSVERSGAVRSRIEVEVSSIDTALSVPGGPSLKTRRTATEFNVRSGQTLVLAGFLSRDTADNVDRVPGLGSLPVLGALFKSTRFQRNETELAILVTPQLVTAAHPDVRTRVGRAAAVLRQAFPQAPGLMNPIRSSDAVREPVEPRGWNPRAGGPGSQWRTGQGEQP*