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SCNpilot_solid_1_scaffold_4_152

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(167310..168731)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003641AC7 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 442.0
  • Bit_score: 564
  • Evalue 1.00e-157
  • rbh
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 442.0
  • Bit_score: 561
  • Evalue 3.30e-157
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS21595.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 442.0
  • Bit_score: 561
  • Evalue 1.60e-156

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGCAGCCGAAACCATTCATCCGCCACAGCGATAGTTCAACGCCGGACGCCTCCGCATCGAAGCGCCGGCATGGCCGTGCGCTGGCGGCGCTGTGCCTGGCCGTGCTGGTGGCCCAGGTCGACACCGCCGTGGTGAATCTGGCGATGCACCGCATCGACGGCGACCTTGGCGCGGGCATGGGCGCCCTGCAATGGGTGCTGGACGGCTACAACCTCGTCTATGCCGTGCTGCTGCTGACGGGCGGCCTGCTGGCGGATCTGTGCGGGCGGCGCCTCGTTTTCGTGATCGGGGCCGTCATTTTCACGGCTTCGTCGCTGCTGTGCGCGGCCGCGCCATCGGTGGCGATCCTGGTCGGCGGCCGGGCGCTGTCAGGGTTCGGAGCGGCTTTGCTCGTACCCGCTTCGCTGGCCATCATTCGCGTGGTCTGGCGCGATCCGGCCGAGCGGGGCCGGGTCCTGGGCCTCTGGGCGGCTTGCAACGGCCTGGCCATGGCAATCGGCCCGACGCTGGGCGGCGTGCTGATCGAACATGCCGGCTGGCGGAGCATCTTTCTCGTCGCCGTGCCGTTCAGCGCGGCGGCGGCCATCCTGGCTCTCGTGTCCATTCCCGAATCCTCCGATCCGCAGGGGCGCCGTTTCGATGGCGCGGCGCAGCTGTTGGGCGCCCTGGCGCTCGGCGGCATGGTCCTGGCGGCCATTCAAGCGCATCGGGCGCCGACCGTGGCAGCGGCCGCCTTTGCCGCCGCGTCCCTGGCGCTGTTGCTGTTCGCCCGCGTGGAAGCGCGCCGCGGAGCGGCCGCCCTGGTGCCGCTGGACGTCTTCCGCTCCCGGACTTTCCGTGGCGCGATGACGGCGACGGCGGGCATGACCTTCGGCATGTATGGCGTGCTGTTTCTGCTCCCGCTTGCCTGGCAGGGCGCCGGCCGGCTCAGCGCTTTGGAGACGGGCCTCGCCTTGATGCCGATGGCACTGGTGTTCCTTGCCGTTTCACCCTGTTCCGGCGCGCTGGCCGAGCGATATGGCGCGCGCATCGTCTCAGCCGGCGGCGTCGCGCTCATCGGCGCCGGACTCGCGCTCATCGGCGTCGAGGCGCATCGGTCGTCGATCATCGCGCAGGAGGCCGGCCTGGCGCTGACTGGCGTCGGCATGGGGCTGGCCACGGGGCCGTTGATGGGTTCGGCCGTGGGCGCCGTGATCGCCGAGCGGGCGGGAACGGCCAGTGCGCTGATCAACGTCGCCCGCATGGCGGGGGCGGCCTTTGGCGTGGCGGCGCTGGGCGCCATCTTCGACGCGGCCGGGGGCGGAGCCGACGGCCTGCGCATCGCGATGCTGATGGGCGGCGCGGTGCAGATCGGCTGCGCCGCCTATGCCTGGCTCGTCATGCCCGCGCCGCGCGGGCATGACGACTATTCAGCCGCCTGA
PROTEIN sequence
Length: 474
MQPKPFIRHSDSSTPDASASKRRHGRALAALCLAVLVAQVDTAVVNLAMHRIDGDLGAGMGALQWVLDGYNLVYAVLLLTGGLLADLCGRRLVFVIGAVIFTASSLLCAAAPSVAILVGGRALSGFGAALLVPASLAIIRVVWRDPAERGRVLGLWAACNGLAMAIGPTLGGVLIEHAGWRSIFLVAVPFSAAAAILALVSIPESSDPQGRRFDGAAQLLGALALGGMVLAAIQAHRAPTVAAAAFAAASLALLLFARVEARRGAAALVPLDVFRSRTFRGAMTATAGMTFGMYGVLFLLPLAWQGAGRLSALETGLALMPMALVFLAVSPCSGALAERYGARIVSAGGVALIGAGLALIGVEAHRSSIIAQEAGLALTGVGMGLATGPLMGSAVGAVIAERAGTASALINVARMAGAAFGVAALGAIFDAAGGGADGLRIAMLMGGAVQIGCAAYAWLVMPAPRGHDDYSAA*