ggKbase home page

SCNpilot_solid_1_scaffold_4_154

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(169626..171371)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctM-like membrane protein n=3 Tax=Bordetella RepID=V9CGL5_BORPT similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 576.0
  • Bit_score: 821
  • Evalue 5.80e-235
  • rbh
TRAP dicarboxylate transporter, DctM subunit similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 581.0
  • Bit_score: 1013
  • Evalue 1.70e-293
  • rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:CDM23086.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 581.0
  • Bit_score: 1013
  • Evalue 8.60e-293

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1746
ATGGAAGCTTTGTTTCTTGCCTATATGGCGCCGATCATGTTCGGCATGCTGGTCATCTTGCTGTTGCTGGGTTTTCCCGTCGCCTTCTCCCTGGCGGCCAACGGCATCCTGTTCGGCCTGATCGGCATCGATCTCGGCCTGCTGTCGCCGGCCTTGTTCCAGGCTCTGCCGCAACGCGTGTTCGGGGTCATGTCCAACGAGTCCCTGCTGGCCGTGCCCTTCTTCACCTTCATGGGGCTGATCCTGGAACGTTCCGGCATGGCCGAGGACCTGCTGGAAACCGTGGGTCAGCTGTTCGGCCCGCTGCGCGGCGGTCTGGCGATCGCGGTCATTCTGGTGGGAGCCATGCTGGCGGCGACCACCGGCGTGGTGTCGGCCTCGGTGATTTCCATGGGTCTGATCTCCCTGCCCATCATGCTGCGCTATGGCTACGACAGGCGCCTGGCAACGGGCGTGATCGCCGCATCGGGCACCCTGTCGCAGATCATTCCGCCGTCGCTGGTGCTGATCGTGCTGGCCGACCAGTTGGGGCGGTCCATCGGCGACATGTACAAAGGCGCCTTCCTGCCGGGCTTCGCCCTGACCGGCCTGTACGTCCTGTACGTGGTGGCCATGGCGATGTTCCGGCCCAAGTCGGCGCCGGCCATTCCGCCCGAGGCCCGCACTTTCGTGGAACCCAATGGCGGCCACGGCGTGCCTTCCCTGCTGGTGCTGATGGCCTTGTCCGTCGCCGTCGCCGTCGGCGGGGTCGAGTTCCTGCTGGACGATCAGGCCCACGTGGACGAACTGATCGTCACCAGCATCCTGCTGTGGGGCGCGGCGGCCTTCGTCATGGCGGTCCTGAACAAGGTCCTGCGCCTGGGCCTGTTGTCGAAGATCGCCGAACGCGTCACCTTCGTCATGATCCCGCCGCTGGCGCTGATCTTCCTGGTGCTGGGCACGATCTTCATCGGCGTGGCCACCCCCACCGAAGGCGGGGCCATGGGGGCGGTGGGCGCCCTGATCATGGCCGTGATCAAGCGCCGGCTGAACCTGAAGCTGCTGCGCCAGGCCATGGACACCACCACCACGCTGACCTGCTTCGTGGTGTTCATCCTGATCGGCTCGTCGGTGTTCAGCCTGACGTTCCGCGGCGTCAACGGCGACCTGTGGGTGGAACACCTGCTGACCGGCCTGCCGGGCGGGCAGATGGGCTTCCTGATCGTCGTCAGCCTGCTGACCTTCGCCCTGGCGTTCTTCCTGGACTTCTTCGAGTTGGCCTTCATCATCGTGCCGCTGATCGGGCCGGTGGCCGACAAGATGGGCATCGACCTGATCTGGCTGGGCGTCCTGCTGGCCGTGAACATGCAGACGTCCTTCATGCACCCGCCCTTCGGCTTCGCGCTGTTCTACCTGAGATCCGTGGCGCCCAAGGAAGACTACAAGGACAAGGTCACGGGCAAGCTGATCGCCAAGGTCACGACGGGCCAGATCTACTGGGGGTCGCTGCCCTTCATCGTCATCCAGATCATCATGGTGGTGGCCGTGCTGGCCTATCCGGGCATGGTGACGCACTACAAGGCGGATCGGCCCCAGATCAACATCGAGGACATCAAGATCGATCCCGGCAATTTCGGCGGCTACGGGGGCGGGGGCTACGGCGATGCCGCCGGCGCCTATGGCGGCGGTTCGGCGGGCGGCGACGCTCCGTCCGACGCCGCGCCGTCGACGCCGTCCGATCAGGACTACAACAATATGTTCAAGTAA
PROTEIN sequence
Length: 582
MEALFLAYMAPIMFGMLVILLLLGFPVAFSLAANGILFGLIGIDLGLLSPALFQALPQRVFGVMSNESLLAVPFFTFMGLILERSGMAEDLLETVGQLFGPLRGGLAIAVILVGAMLAATTGVVSASVISMGLISLPIMLRYGYDRRLATGVIAASGTLSQIIPPSLVLIVLADQLGRSIGDMYKGAFLPGFALTGLYVLYVVAMAMFRPKSAPAIPPEARTFVEPNGGHGVPSLLVLMALSVAVAVGGVEFLLDDQAHVDELIVTSILLWGAAAFVMAVLNKVLRLGLLSKIAERVTFVMIPPLALIFLVLGTIFIGVATPTEGGAMGAVGALIMAVIKRRLNLKLLRQAMDTTTTLTCFVVFILIGSSVFSLTFRGVNGDLWVEHLLTGLPGGQMGFLIVVSLLTFALAFFLDFFELAFIIVPLIGPVADKMGIDLIWLGVLLAVNMQTSFMHPPFGFALFYLRSVAPKEDYKDKVTGKLIAKVTTGQIYWGSLPFIVIQIIMVVAVLAYPGMVTHYKADRPQINIEDIKIDPGNFGGYGGGGYGDAAGAYGGGSAGGDAPSDAAPSTPSDQDYNNMFK*