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SCNpilot_solid_1_scaffold_4_172

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(195156..195668)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter permease n=1 Tax=Martelella mediterranea RepID=UPI00037E10A1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 189
  • Evalue 3.30e-45
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EKF41461.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriace similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 156.0
  • Bit_score: 179
  • Evalue 4.80e-42
tripartite ATP-independent periplasmic transporter DctQ similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 145.0
  • Bit_score: 100
  • Evalue 5.70e-19

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGATACTCTGAGTCGGATGGTGGACCGGTTTTCCCGAGGACTGGGGTACCTGGCCGGCCTGCTCATCTTCATCATCGCCGCCTTGCAGATCAGCGAGATCCTCAGCCGCAATCTGCTGAACACCAGCCTGAGCATCGTCTGGGAAATCGCCGCCTACCTGCATATCGTGGCCATATTCCTGGCCGCGGCATTCACCCTGCGCAGCGGCGGGCATATCCGCGTCACGCTGCTTCAGTCGGCCAACCCGCGCCGCTTCGAACTCATCAGCACGTTCGCGGGCCTGGCGATCTCGGTGTTCCTGAGCTATGCCCTGGTGTCGCTGGCCTGGCGCTACGGCGTCAGCGGCCGCACGTCCGGGACCACCAACGATATCCCCCTGGTGTATCCGGCCTCGCTGGTGGCTTTCGGTTCCGTCCTGCTGAGCATTCAGCTGGCCTTGCGGCTGTTCCAGGCCGCAACGGGCCGCCCGGCCGAGTTGAACGAGCACGAAGCGGTCCTGACCGCCGATTGA
PROTEIN sequence
Length: 171
MDTLSRMVDRFSRGLGYLAGLLIFIIAALQISEILSRNLLNTSLSIVWEIAAYLHIVAIFLAAAFTLRSGGHIRVTLLQSANPRRFELISTFAGLAISVFLSYALVSLAWRYGVSGRTSGTTNDIPLVYPASLVAFGSVLLSIQLALRLFQAATGRPAELNEHEAVLTAD*