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SCNpilot_solid_1_scaffold_4_47

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(52006..52932)

Top 3 Functional Annotations

Value Algorithm Source
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase (EC:2.5.1.90 2.5.1.29 2.5.1.1 2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 308.0
  • Bit_score: 562
  • Evalue 5.60e-158
  • rbh
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase {ECO:0000313|EMBL:CDM23203.1}; EC=2.5.1.1 {ECO:0000313|EMBL similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 308.0
  • Bit_score: 562
  • Evalue 2.80e-157
Octaprenyl-diphosphate synthase n=6 Tax=Bordetella RepID=J7QGK9_BORP1 similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 308.0
  • Bit_score: 500
  • Evalue 1.60e-138
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCAGGCGGTCGACGCCGTCATCCGCGCCCGTCTGGATTCCGAAGTCGTCCTGATCCGCACGATCGGCGATTACATCGTCGGCGCGGGCGGCAAGCGCATGCGCCCGGCCATGGTGCTGCTGGTGGCGGGCGCCCTGGGCTATCAGGGGAACAATCATCACCGCCTGGCGGCCGTGGTGGAATTCATCCATACCGCCACGCTGCTGCACGACGACGTGGTCGATGAATCCGACATGCGCCGGGGCCGCGACACGGCCAATGCCGTGTTCGGCAACGCCGCCAGCGTGCTGGTGGGCGATTACCTGTATTCGCGGTCCTTCGAAATGATGGTCGAATCGGATTCGATGGCGGCCATGGCCGTGCTATCGGCCGCCACCACGATCATCGCGGAAGGCGAGGTCCTGCAGCTGCTGAACGTCCACGATCCGGACGTCTCCCTGGACCGCTATCTGCAGGTCGTGCGCTACAAGACCGCGAAACTCTTCGAAGCCGCCGCCCAGGTGGGAGCCATCATTTCCGGCGCCACGCCCGAACAGGAATCCGCCGCTGCGGCCTACGGCCGCCACATGGGCACGGCCTTCCAGCTGATCGACGACGTGCTGGACTACAGCGGCGACGTGCAGGCGCTGGGCAAGAACGTGGGCGACGATCTGCGCGAAGGCAAGCCTACGCTGCCGCTGATCCGCGTGCTGGAGACGGGCTCCGCCGAACAGCGCGCCCTGATCCGCCGCGCCATCGAAACCGGCGACGCCGACTTCGAGGCCGTGGCCCGCGCCATCCACGCCACCGATGCGCTGGACTACACCCGCAAGGCCGCCCAGGCCGAAGCCGATCTGGCCCGCCAGGCGCTGTCCGCCTTCCCGAATTCCGTTTACCGCGAAACTCTGCTAAAATTCTGTGCTTTCGCGGTCGAGCGCGACCGTTGA
PROTEIN sequence
Length: 309
MQAVDAVIRARLDSEVVLIRTIGDYIVGAGGKRMRPAMVLLVAGALGYQGNNHHRLAAVVEFIHTATLLHDDVVDESDMRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVESDSMAAMAVLSAATTIIAEGEVLQLLNVHDPDVSLDRYLQVVRYKTAKLFEAAAQVGAIISGATPEQESAAAAYGRHMGTAFQLIDDVLDYSGDVQALGKNVGDDLREGKPTLPLIRVLETGSAEQRALIRRAIETGDADFEAVARAIHATDALDYTRKAAQAEADLARQALSAFPNSVYRETLLKFCAFAVERDR*