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SCNpilot_solid_1_scaffold_8_108

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 123746..125266

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FA87EA similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 478.0
  • Bit_score: 498
  • Evalue 7.50e-138
RND efflux system, outer membrane lipoprotein CmeC similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 505.0
  • Bit_score: 763
  • Evalue 3.50e-218
  • rbh
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:CDM25019.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 505.0
  • Bit_score: 763
  • Evalue 1.80e-217

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGCGCAGGCATACCTCGTCCCGCCGGATCCGGCACGGCGCGTCCGGGCCGGCCGCCGGCATGGCCTGCGGCCGCTTCCCGCTCTTGCGCATCCTGGGCGCCGCCGGCATGCTGGCCCTGTCGGCCTGCGTCAACCTGGCGCCCGCGACCCGGCTCCCGGCTCCTCCGGTCGCCGATGCCTGGCCCGCCGACGCCGAAACAGCGCCCGCGCCCGCCACCACGCGCGCTTGGCGGGATCTGGACTGGGCGAACTATTTCCAGGACGCCGACATGCGCCGGCTGATCAGCCTGGCTCTGGAGCACAACCGCGACCTGAGGCTGGCCGGGCTGCGCGTGCGCGAAGCCGAAGCCGCCCACCGGATTCAGCGGGCCGACCTGTCGCCATCGATCAGCATCCAGGGCGGCGTCGAACGCAGCCGCGTGCCCGGCGACCTCAATCCCGCAGGCCAGCCGCAGATCCAGTCCCGCAGCCAGGTCGGCATCGGCCTCACCCATTGGGAGATCGACCTCTGGGGCCGGATCCGCAACCTGAAAGACGCCGCGCTGGACGACTGGCTGGCCTCGGACGCGGCCCGCCAGGCTGTCCGGGTGGCGCTGGTGCGCCAGGTGGCCGACTCGGTGCTGGTGCTACGGGAACTGGACCAGCGCGCCTTTCTGGCGGACGAAGCCGTGCGCAACCGCCGGCAGTCCCTGGAAATCTTCCAGCGGCGCAAGGGCGCGGGGTCCTCCTCGGAACTGGAACTGACCCAGGTGCGCACCCTGTTGATCCAGGCCGAATCCCTGCGGGTTCAACTGCAACAGGAACGGGCCGCCGCCGCGCACGCGCTGACGCTGCTGACGGGCGTCGCGAACGCCGGCATCGCGCCGGCCGAGGCCATCGATCTGGAATCCATGCGGCTGACCCGTCTAGAGCCGGGCCTGCCGTCCGAGGTCCTGCTGTCCCGGCCGGACATCCGGGCCGCCGAATACCAGCTGCGGTCGGCCCACGCCCGGATCGGCGCCGCGCGCGCCGCATTCCTGCCGCGCATCGCCCTGACTTCGAGCACCGGCTCGGCCAGCGCGGAACTCGACGGCCTGTTCGGCGGCGGGAGCCGGGCCTGGACGTTCGCGCCGGTCATCGAACTGCCGATCTTCACGGCGGGCCGCTTGAGGACCACCCTGGACGTGACCGAGGTCCGACGCGACATGGCGGTGGCGACCTACGAGAAAAACATCCAGACCGCCTTCCGCGAAGTGGCCGATGCCCTGTCCGCGCGCCAGGGCCTGGCCGAACAGATGGACATCCAGGCCCGCATGGCGCGGACCCAGGCCGCGCGGGCCGAACTGGCCCAGCTGCGCTACGACAGCGGCGCCGCGCCCTACCTGGAAGTCCTGGACGCCCAGCGCGATCTGCTGACGGCTCAGCAGCAACTGGTTCAAGTCCGGCGCGCCTGGCTATCGAGCCAGGTGGCTCTGTACGCCGCCCTGGGCGGCGGCGCCGGACCCGCCCTTCCAAACTCTCCCGCCCTCCAAGCGACATGA
PROTEIN sequence
Length: 507
MRRHTSSRRIRHGASGPAAGMACGRFPLLRILGAAGMLALSACVNLAPATRLPAPPVADAWPADAETAPAPATTRAWRDLDWANYFQDADMRRLISLALEHNRDLRLAGLRVREAEAAHRIQRADLSPSISIQGGVERSRVPGDLNPAGQPQIQSRSQVGIGLTHWEIDLWGRIRNLKDAALDDWLASDAARQAVRVALVRQVADSVLVLRELDQRAFLADEAVRNRRQSLEIFQRRKGAGSSSELELTQVRTLLIQAESLRVQLQQERAAAAHALTLLTGVANAGIAPAEAIDLESMRLTRLEPGLPSEVLLSRPDIRAAEYQLRSAHARIGAARAAFLPRIALTSSTGSASAELDGLFGGGSRAWTFAPVIELPIFTAGRLRTTLDVTEVRRDMAVATYEKNIQTAFREVADALSARQGLAEQMDIQARMARTQAARAELAQLRYDSGAAPYLEVLDAQRDLLTAQQQLVQVRRAWLSSQVALYAALGGGAGPALPNSPALQAT*