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SCNpilot_solid_1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 552 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_8_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241..1815
DNA (1575bp) protein (525aa)
ribonuclease n=1 Tax=Pusillimonas noertemannii RepID=UPI00030D5A2F rbh
Cytoplasmic axial filament protein CafA and Ribonuclease G rbh
Cytoplasmic axial filament protein CafA and Ribonuclease G {ECO:0000313|EMBL:CDM24908.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castella
SCNpilot_solid_1_scaffold_8_2
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1939..2622
DNA (684bp) protein (228aa)
Transcriptional regulator, GntR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKW8_RUEPO
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC45696.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
GntR family transcriptional regulator
SCNpilot_solid_1_scaffold_8_3
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2929..3435
DNA (507bp) protein (169aa)
Putative TRAP transporter small permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5K9_9BRAD
putative TRAP transporter small permease protein
Putative TRAP transporter small permease protein {ECO:0000313|EMBL:BAL76046.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" s
SCNpilot_solid_1_scaffold_8_4
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3490..4758
DNA (1269bp) protein (423aa)
Putative TRAP transporter large permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5K8_9BRAD rbh
putative TRAP transporter large permease protein rbh
Putative TRAP transporter large permease protein {ECO:0000313|EMBL:BAL76045.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" s
SCNpilot_solid_1_scaffold_8_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4802..5779
DNA (978bp) protein (326aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Nitratireductor indicus C115 RepID=K2PSW2_9RHIZ rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EKF44177.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
TRAP dicarboxylate transporter subunit DctP rbh
SCNpilot_solid_1_scaffold_8_6

Not on your lists

5930..6802
DNA (873bp) protein (291aa)
UPI0003CEA0BC related cluster n=2 Tax=unknown RepID=UPI0003CEA0BC
Marine sediment metagenome DNA, contig: S01H1_L06191 {ECO:0000313|EMBL:GAF72655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dihydrodipicolinate synthetase family protein
SCNpilot_solid_1_scaffold_8_7
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6831..8312
DNA (1482bp) protein (494aa)
Aldehyde dehydrogenase (EC:1.2.1.3)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J070_9BURK rbh
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:ERT55553.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;
SCNpilot_solid_1_scaffold_8_8
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8336..9661
DNA (1326bp) protein (442aa)
D-serine dehydratase (EC:4.3.1.18)
Probable D-serine dehydratase {ECO:0000255|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000255|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000255|HAMAP-Rule:MF_01030}; Short=DSD {ECO:0000255|HAMAP-Rule
Probable D-serine dehydratase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=SDHD_CUPPJ rbh
SCNpilot_solid_1_scaffold_8_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9658..10095)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J026_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24909.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_8_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10149..11927)
DNA (1779bp) protein (593aa)
Lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.25) rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703, ECO:0000313|EMBL:CDM24910.1}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1437824 species="Bacteria; Proteob
ATP-binding protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E62118 rbh
SCNpilot_solid_1_scaffold_8_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12053..13030
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003686B68 rbh
ADP-heptose--lipooligosaccharide heptosyltransferase II rbh
ADP-heptose--lipooligosaccharide heptosyltransferase II {ECO:0000313|EMBL:CDM24911.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_8_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13027..13791
DNA (765bp) protein (255aa)
Membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GME7_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24912.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_8_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13817..15016)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F8C2A4 rbh
Glycosyl transferase, group 1 family protein rbh
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:CDM24913.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_8_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15013..15753)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000381B7B2 rbh
Carbohydrate Esterase Family 4 rbh
Carbohydrate Esterase Family 4 {ECO:0000313|EMBL:CDM24914.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_8_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15777..16889)
DNA (1113bp) protein (371aa)
Putative glycosyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ITR6_BORPD rbh
putative transferase rbh
Putative transferase {ECO:0000313|EMBL:CDM24915.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_8_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16886..17656)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E04E6D rbh
putative transferase rbh
Putative transferase {ECO:0000313|EMBL:CDM24916.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_8_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17699..18544)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D85779 rbh
Polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:CDM24917.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_8_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18541..19641)
DNA (1101bp) protein (367aa)
glycosyl transferase n=1 Tax=Pusillimonas noertemannii RepID=UPI000303EC0C rbh
putative transferase rbh
Putative transferase {ECO:0000313|EMBL:CDM24918.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_8_19
Gallibacterium anatis, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19638..20417)
DNA (780bp) protein (260aa)
Glycosyltransferase family 25 n=1 Tax=Gallibacterium anatis (strain UMN179) RepID=F4HEY0_GALAU
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:ERF78954.1}; TaxID=1195244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium a
SCNpilot_solid_1_scaffold_8_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..23893)
DNA (3480bp) protein (1160aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CDM24919.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacter
DNA polymerase III alpha subunit (EC:2.7.7.7) rbh
DNA polymerase III subunit alpha n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D43071 rbh
SCNpilot_solid_1_scaffold_8_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23918..27811)
DNA (3894bp) protein (1298aa)
ATP-dependent helicase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003017B15 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24921.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
hypothetical protein rbh
SCNpilot_solid_1_scaffold_8_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27881..29236
DNA (1356bp) protein (452aa)
N-acetylglutamate synthase (EC:2.3.1.1) rbh
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105, ECO:0000313|EMBL:CDM24922.1};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}
Amino-acid acetyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMD6_PUSST rbh
SCNpilot_solid_1_scaffold_8_23
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29268..30359
DNA (1092bp) protein (364aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
rmlB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MMK0_PSEPS rbh
SCNpilot_solid_1_scaffold_8_24
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30359..31333
DNA (975bp) protein (325aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Burkholderia kururiensis RepID=UPI0003449927
Uncharacterized protein {ECO:0000313|EMBL:KGP02171.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
SCNpilot_solid_1_scaffold_8_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31368..31640
DNA (273bp) protein (91aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMC8_PUSST
Probable Fe(2+)-trafficking protein YggX
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace
SCNpilot_solid_1_scaffold_8_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31702..32421)
DNA (720bp) protein (240aa)
Putative transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMC7_PUSST rbh
Phosphate transport system regulatory protein PhoU rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_8_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32538..33221)
DNA (684bp) protein (228aa)
Ribose 5-phosphate isomerase A (EC:5.3.1.6) rbh
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=2 Tax=Alcaligenes RepID=M5ITF9_9BURK rbh
SCNpilot_solid_1_scaffold_8_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33387..34127
DNA (741bp) protein (247aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:CDM23965.1}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:CDM23965.1};; TaxID=1437824 species="Bacteria; Proteobacter
Carbonic anhydrase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KN9_BRADU
SCNpilot_solid_1_scaffold_8_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34287..35762
DNA (1476bp) protein (492aa)
Probable phosphate transporter n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZK3_BORPD rbh
Probable low-affinity inorganic phosphate transporter rbh
Probable low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:CDM24929.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell
SCNpilot_solid_1_scaffold_8_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35798..36622)
DNA (825bp) protein (275aa)
Putrescine ABC transporter, permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMC4_PUSST rbh
Putrescine transport system permease protein PotI rbh
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:CDM24933.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
Displaying items 1-30 of 552 in total

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