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SCNpilot_solid_1_scaffold_8

Search features with annotation key words

Displaying items 61-90 of 552 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_8_61
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65434..66591
DNA (1158bp) protein (386aa)
iron-sulfur protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0A4A0 rbh
Iron-sulfur protein in siderophore [Alcaligin] cluster rbh
Iron-sulfur protein in siderophore [Alcaligin] cluster {ECO:0000313|EMBL:CDM24976.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniel
SCNpilot_solid_1_scaffold_8_62
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66650..67516)
DNA (867bp) protein (289aa)
Thiosulfate sulfurtransferase, rhodanese (EC:2.8.1.1) rbh
Thiosulfate sulfurtransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GM94_PUSST rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defrag
SCNpilot_solid_1_scaffold_8_63
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67513..68424)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NXF7_9BORD rbh
Permease of the drug/metabolite transporter superfamily rbh
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM24978.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_8_64
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68511..69386
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
Protease HtpX homolog n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GM92_PUSST rbh
heat shock protease rbh
SCNpilot_solid_1_scaffold_8_65
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69401..71059
DNA (1659bp) protein (553aa)
Na+/Pi-cotransporter n=2 Tax=Alcaligenes RepID=M5J131_9BURK rbh
Sodium-dependent phosphate transporter rbh
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:CDM24980.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_8_66
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71090..73816)
DNA (2727bp) protein (909aa)
DNA polymerase I {ECO:0000313|EMBL:CDM24981.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM24981.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
DNA polymerase I (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Achromobacter piechaudii HLE RepID=J4YGI1_9BURK rbh
SCNpilot_solid_1_scaffold_8_67
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73878..74486
DNA (609bp) protein (203aa)
Lysine decarboxylase n=2 Tax=Alcaligenes RepID=M5J2F0_9BURK
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24982.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_8_68
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74598..75386
DNA (789bp) protein (263aa)
Cationic amino acid ABC transporter periplasmic-binding protein n=2 Tax=Alcaligenes RepID=M5J046_9BURK rbh
Lysine-arginine-ornithine-binding periplasmic protein precursor rbh
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:CDM24983.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell
SCNpilot_solid_1_scaffold_8_69
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75467..76156
DNA (690bp) protein (230aa)
Amino acid ABC transporter, permease protein n=2 Tax=Burkholderia thailandensis RepID=Q2T054_BURTA rbh
Histidine ABC transporter, permease protein HisQ rbh
Histidine ABC transporter, permease protein HisQ {ECO:0000313|EMBL:CDM24984.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_8_70
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76153..76863
DNA (711bp) protein (237aa)
Histidine/lysine/arginine/ornithine ABC transporter permease HisM n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B8U0_ALCFA rbh
Histidine ABC transporter, permease protein HisM rbh
Histidine ABC transporter, permease protein HisM {ECO:0000313|EMBL:CDM24985.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_8_71
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76869..77636
DNA (768bp) protein (256aa)
Histidine transport ATP-binding protein n=18 Tax=pseudomallei group RepID=I1WLG4_BURPE rbh
Histidine ABC transporter, ATP-binding protein HisP rbh
Histidine ABC transporter, ATP-binding protein HisP {ECO:0000313|EMBL:CDM24986.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.
SCNpilot_solid_1_scaffold_8_72
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77678..78853)
DNA (1176bp) protein (392aa)
Putative esterase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1V7_BORPD
Putative esterase rbh
Putative esterase {ECO:0000313|EMBL:CDM24991.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragra
SCNpilot_solid_1_scaffold_8_73
unknown

Not on your lists

79109..79558
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_8_74
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79637..81457)
DNA (1821bp) protein (607aa)
GTP-binding elongation factor n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC7_PUSST rbh
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CDM24994.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
GTP-binding protein TypA/BipA rbh
SCNpilot_solid_1_scaffold_8_75
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81454..82209)
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase B (EC:4.2.1.70) rbh
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CDM24995.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:M
tRNA pseudouridine synthase B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC6_PUSST rbh
SCNpilot_solid_1_scaffold_8_76
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82245..82655)
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC5_PUSST
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CDM24996.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castella
SCNpilot_solid_1_scaffold_8_77
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82674..85583)
DNA (2910bp) protein (970aa)
Translation initiation factor IF-2 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC4_PUSST rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Translation initiation factor 2 rbh
SCNpilot_solid_1_scaffold_8_78
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85635..87119)
DNA (1485bp) protein (495aa)
Transcription elongation protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC3_PUSST rbh
Transcription termination protein NusA rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castella
SCNpilot_solid_1_scaffold_8_79
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87116..87589)
DNA (474bp) protein (158aa)
Ribosome maturation factor RimP n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC2_PUSST
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_8_80
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87853..89418)
DNA (1566bp) protein (522aa)
Ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70) rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace
Pseudouridylate synthase n=3 Tax=Bordetella pertussis RepID=V8V1X9_BORPT rbh
SCNpilot_solid_1_scaffold_8_81
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89450..90097)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC0_PUSST
Segregation and condensation protein B rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417, ECO:0000313|EMBL:CDM25001.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_8_trna_1
unknown

Not on your lists

90166..90239
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_8_82
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90536..91342
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000370DEDD rbh
Transcriptional regulator, AraC family rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDM26031.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_8_83
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91457..92542
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2F2F7 rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EHR48625.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sac
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
SCNpilot_solid_1_scaffold_8_84
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92542..93306
DNA (765bp) protein (255aa)
ABC transporter n=1 Tax=Glaciibacter superstes RepID=UPI0003B58E96 rbh
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIH98237.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomono
ABC transporter-like protein
SCNpilot_solid_1_scaffold_8_85
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93327..94178
DNA (852bp) protein (284aa)
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B701D8 rbh
ABC transporter permease {ECO:0000313|EMBL:KIH98335.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_solid_1_scaffold_8_86
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94209..95306)
DNA (1098bp) protein (366aa)
Ribonucleotide-diphosphate reductase subunit beta {ECO:0000313|EMBL:EIM02049.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EIM02049.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC:1.17.4.1)
Ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF7_9GAMM rbh
SCNpilot_solid_1_scaffold_8_87
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95383..97881)
DNA (2499bp) protein (833aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF8_9GAMM rbh
SCNpilot_solid_1_scaffold_8_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98080..101256)
DNA (3177bp) protein (1059aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T452_ACIDE rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM25002.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_solid_1_scaffold_8_89
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101452..102735)
DNA (1284bp) protein (428aa)
TRAP transporter, DctM subunit n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRG1_9PROT
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFG67572.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Mi
TRAP dicarboxylate transporter subunit DctM
Displaying items 61-90 of 552 in total

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