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SCNpilot_solid_1_scaffold_8_75

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(81454..82209)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 252.0
  • Bit_score: 437
  • Evalue 2.20e-120
  • rbh
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CDM24995.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:M similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 252.0
  • Bit_score: 437
  • Evalue 1.10e-119
tRNA pseudouridine synthase B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC6_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 249.0
  • Bit_score: 360
  • Evalue 1.20e-96
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGGCTTCCCGACGCGGGCAGATGCTCGACGGTGTCCTGTTGCTGGACAAACCCGAGGGCCTCTCCAGTAATCATGCGCTGCAACGCGCCAAACGGACGGTGGATGCCCGCAAGGCGGGGCATACCGGCACGCTGGACCCCTTCGCCACGGGCCTGCTGATCTGCTGTTTCGGCCGCGCCACGAAAATTTCCGCGGCCATGCTCGAAGCCGACAAGGTCTACGAGGCGACGGTCGCCTTCGGCGAGGAAACCGACAGCGGAGACCTGACGGGCCACATCGTGGCGCGCGCGGACGCCGTCCCCGCCGTCACGGCCGATCAACTGGAATCCGCGCTGGCCGGGTTCCGGGGCGAGATCGAACAGATCCCGCCCATGGTGTCGGCGCTCAAGCGCGACGGCAAGCCCTTGTACGAATACGCGCGCCAGGGCATCGAACTGGAGCGCCCGCCGCGCCGGATCACCATTCACGCGCTGGACCTGCTGTCCTGCGACGGCGTGTCCGCGCGGCTGAGAGTGCATTGCAGCAAGGGCACCTACGTGCGCACCCTGGCCCAGGACATCGGGCGCCGCCTGGGGTGCCTGGGGCATCTGTCGGCCTTGCGGCGCACGGCCGTCGGCCCCTTCACGATCGAGCACGCCGTCGGGCTGGAAGCCCTGCAGGCCATGGCCGCGCCACAGTCGGCGCTCATCCCTTTACACGCCTTGCCGGACGGACTGCGCCCGGCAAGTGTTTCTACCGAGGAAATCACCTTATGA
PROTEIN sequence
Length: 252
MASRRGQMLDGVLLLDKPEGLSSNHALQRAKRTVDARKAGHTGTLDPFATGLLICCFGRATKISAAMLEADKVYEATVAFGEETDSGDLTGHIVARADAVPAVTADQLESALAGFRGEIEQIPPMVSALKRDGKPLYEYARQGIELERPPRRITIHALDLLSCDGVSARLRVHCSKGTYVRTLAQDIGRRLGCLGHLSALRRTAVGPFTIEHAVGLEALQAMAAPQSALIPLHALPDGLRPASVSTEEITL*