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SCNpilot_solid_1_scaffold_8

Search features with annotation key words

Displaying items 31-60 of 552 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_8_31
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36619..37518)
DNA (900bp) protein (300aa)
Putative inner membrane permease polyamine transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMC3_PUSST rbh
Putrescine transport system permease protein PotH rbh
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:CDM24934.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_8_32
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37515..38645)
DNA (1131bp) protein (377aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
Polyamine transport ATP-binding protein n=2 Tax=Alcaligenes RepID=M5J012_9BURK rbh
Putrescine transport ATP-binding protein PotG rbh
SCNpilot_solid_1_scaffold_8_33
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38645..39742)
DNA (1098bp) protein (366aa)
Putrescine-binding periplasmic protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMC1_PUSST rbh
Putrescine ABC transporter putrescine-binding protein PotF rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_8_34
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39804..40502)
DNA (699bp) protein (233aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1437824 species="
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJT7_BORPD
3-deoxy-D-manno-octulosonic-acid kinase rbh
SCNpilot_solid_1_scaffold_8_35
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40499..41284)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IUR7_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24938.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_8_36
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41295..42650)
DNA (1356bp) protein (452aa)
DNA repair protein RadA n=1 Tax=Bordetella sp. FB-8 RepID=UPI000367AD99 rbh
DNA repair protein RadA rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_8_37
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42650..43366)
DNA (717bp) protein (239aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100) rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDM24940.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM24940.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Short chain dehydrogenase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JFI4_ALCFA rbh
SCNpilot_solid_1_scaffold_8_38
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43388..44503)
DNA (1116bp) protein (372aa)
Alanine racemase (EC:5.1.1.1) rbh
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CDM24941.1}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CDM24941.1};; TaxID=1437824 species="Bacteria; Proteobact
Alanine racemase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=ALR_BORPD rbh
SCNpilot_solid_1_scaffold_8_39
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44609..45484
DNA (876bp) protein (292aa)
Phytoene synthase (EC:2.5.1.32) rbh
Phytoene synthase {ECO:0000313|EMBL:CDM24942.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CDM24942.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
Phytoene synthase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FR87_9BURK
SCNpilot_solid_1_scaffold_8_40
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45474..46337
DNA (864bp) protein (288aa)
Phytoene synthase (EC:2.5.1.32) rbh
Phytoene synthase {ECO:0000313|EMBL:CDM24943.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CDM24943.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
Phytoene synthase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XYF4_ALCXX rbh
SCNpilot_solid_1_scaffold_8_41
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46334..47629
DNA (1296bp) protein (432aa)
Zeta-carotene desaturase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMB2_PUSST rbh
Phytoene desaturase, pro-zeta-carotene producing rbh
Phytoene desaturase, pro-zeta-carotene producing {ECO:0000313|EMBL:CDM24944.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_8_42
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47631..48617)
DNA (987bp) protein (329aa)
Arginase (EC:3.5.3.1) rbh
Arginase {ECO:0000256|RuleBase:RU361159, ECO:0000313|EMBL:CDM24080.1}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159, ECO:0000313|EMBL:CDM24080.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betapr
Arginase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUY8_9BURK
SCNpilot_solid_1_scaffold_8_43
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48651..49727)
DNA (1077bp) protein (359aa)
Ornithine cyclodeaminase (EC:4.3.1.12) rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:CDM24945.1}; EC=4.3.1.12 {ECO:0000313|EMBL:CDM24945.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
ornithine cyclodeaminase n=1 Tax=Variovorax paradoxus RepID=UPI00036D2C14
SCNpilot_solid_1_scaffold_8_44
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49850..50293
DNA (444bp) protein (148aa)
Transcriptional regulator, AsnC family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7V5_LEPCP
AsnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
AsnC family transcriptional regulator
SCNpilot_solid_1_scaffold_8_45
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50304..51704)
DNA (1401bp) protein (467aa)
Threonine synthase (EC:4.2.3.1) rbh
Threonine synthase {ECO:0000313|EMBL:CDM24946.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDM24946.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
Threonine synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMB1_PUSST rbh
SCNpilot_solid_1_scaffold_8_46
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51701..53005)
DNA (1305bp) protein (435aa)
Homoserine dehydrogenase (EC:1.1.1.3) rbh
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CDM24947.1}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CDM24947.1};; TaxID=1437824 species="Bacteria; Proteo
Homoserine dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMB0_PUSST rbh
SCNpilot_solid_1_scaffold_8_47
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53002..54189)
DNA (1188bp) protein (396aa)
Aminotransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA9_PUSST rbh
PLP-dependent aminotransferase YfdZ rbh
PLP-dependent aminotransferase YfdZ {ECO:0000313|EMBL:CDM24948.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_8_48
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54365..54811
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UPH5_ALCFA
Membrane protein
Membrane protein {ECO:0000313|EMBL:CDM24950.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragran
SCNpilot_solid_1_scaffold_8_49
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54808..55278
DNA (471bp) protein (157aa)
Thiol peroxidase, Bcp-type (EC:1.11.1.15)
Thiol peroxidase, Bcp-type {ECO:0000313|EMBL:CDM24951.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CDM24951.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Antioxidant, AhpC/TSA family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA19_9BURK
SCNpilot_solid_1_scaffold_8_50
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55298..57109
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA6_PUSST rbh
phosphate starvation-inducible protein PhoH rbh
Phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:CDM24952.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_8_51
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57090..58115
DNA (1026bp) protein (342aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) rbh
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DC748D
SCNpilot_solid_1_scaffold_8_52
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58182..59552)
DNA (1371bp) protein (457aa)
Replicative DNA helicase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA4_PUSST rbh
Replicative DNA helicase rbh
Replicative DNA helicase {ECO:0000313|EMBL:CDM24967.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_8_53
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(59667..60122)
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA3_PUSST
LSU ribosomal protein L9p
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_8_54
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(60138..60455)
DNA (318bp) protein (106aa)
30S ribosomal protein S18 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA2_PUSST
SSU ribosomal protein S18p / SSU ribosomal protein S18p, zinc-independent
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_8_55
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60456..60677)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0DD0F
Primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_8_56
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(60769..61134)
DNA (366bp) protein (122aa)
30S ribosomal protein S6 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F5BF18
SSU ribosomal protein S6p
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_8_57
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61336..62145)
DNA (810bp) protein (270aa)
GTP cyclohydrolase I type 2 (EC:3.5.4.16) rbh
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527, ECO:0000313|EMBL:CDM24972.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobact
GTP cyclohydrolase FolE2 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=GCH4_BORPD rbh
SCNpilot_solid_1_scaffold_8_58
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62142..64001)
DNA (1860bp) protein (620aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose 5-phosphate synthase (EC:2.2.1.7) rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T438_BORBO rbh
SCNpilot_solid_1_scaffold_8_59
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64035..64955)
DNA (921bp) protein (307aa)
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase (EC:2.5.1.90 2.5.1.29 2.5.1.1 2.5.1.10) rbh
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase {ECO:0000313|EMBL:CDM24974.1}; EC=2.5.1.1 {ECO:0000313|EMBL
Geranyltranstransferase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U785_9BURK rbh
SCNpilot_solid_1_scaffold_8_60
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64952..65230)
DNA (279bp) protein (93aa)
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T447_ALCXX
Displaying items 31-60 of 552 in total

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