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SCNpilot_solid_1_scaffold_8_80

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(87853..89418)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 561.0
  • Bit_score: 733
  • Evalue 4.00e-209
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 561.0
  • Bit_score: 733
  • Evalue 2.00e-208
Pseudouridylate synthase n=3 Tax=Bordetella pertussis RepID=V8V1X9_BORPT similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 567.0
  • Bit_score: 592
  • Evalue 3.00e-166
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGACAGCAGAACTCGAAACGACATCGCATGCCTCTTCCCAGGGGCCGGCCGAGTCATCGGCCTCGCCCAAGGAAGGCAAGGGCGCTTCCGGCCGTTCACGCGGGGGCCGCAAGCTGCGCACGCCGTTTCGCCGCCGCCGCGGGGATGCGCAGGGGGAAACGCCGCCTGCGGAACAGGCCCAGGCCGTGGATGCCGGGCCCGCCGAGGAAGCCGACCGCGCTTTGTCCTATCTGGGGGATCACCAGACCCGACAGCGCCTGGACCGCTATCTGAACAGCGACGCCCTGATGCCCAAGCTGCACAAGGTCCTGGCCGAAGCCGGCATCGGCTCGCGCCGCGACATGGAAGAACTCATCGTCGCCGGGCGCGTGTCCGTCAACGGCGAACCGGCCCACGTGGGCCAGCGCGTGGGGCCCAACGACAAGGTGCGCGTCAATGGCCGCCTGGTGTCGCGCCCCAAGGCCGGCAAACTGCCCCGAGTGATCCTCTACCATAAGCCGGCGGGCGAGATCGTCAGCCACGACGACCCCGAAGGGCGCGCCACCGTCTTCGCGCGGCTGCCGCGCATCCGCAGCGGCAAATGGCTGTCGGTCGGGCGGCTGGACCTGAATACCGAAGGCCTGCTGATCCTGACGACGTCGGGCGAGCTGGCCAATCGCCTGTCCCATCCCCGCTACGGGGCCGAGCGCGAATACGCCGTGCGCGTCCTGGGGGAACTGGCCGACGAAAAACAGACGGAACTGACGACCGGCATCCAGCTGGAAGACGGCCAGGCGCAGTTCAATTCCCTGGATTACATCGGCGGCGAAGGCAGCAATCGCTGGTATCGGGTCACGCTGTCCGAGGGCCGCAACCGCGAAGTCCGGCGCATGTTCCTGGCCGCCGGCGTGACGGTCAGCCGCCTGATCCGCACCCGGTTCGGCGATGTCATCCTGCCCAGCAACTTGCGGCGCGGCCGCTGGGAAGAGCTGGACGAGCAACTGGTGGGCGCCCTGATGGTGCAGCTGGGGCTGATTCGGACCGGCGACGATGATGCCGATGGCCAGGTCGAGCGCCAGCCGCTGTCGCATGCCAGCGCGCTGCCGCCGGGCTTCGGCACGCCGGGCCAGAACGGCCAGAATGGCGCCCGCCTGAATCGGCGCGGCCGGGTGTCGGGAGGGCGCGGCAAGGCCTCGATCGATCCCTTCACGACGGGCCTGCTGATCAGCGGCGGCCTGGCCAATGGCCACCCGGACGGCGGCAAGCAGCATGCCTCGCCCAAGCCGCATCACAAATCCAAGCCCTCCAAGGCCGGCGGCCACGCCGGGCGGCCGGGGAAGGCAGGCAAGCCGTCCAGGCCGCAGCCGGAGGGCCAGCAGCGCTCCCGCGAGCCCAAGGCCCGGGTGCGGTCCGCTTCGGGGGATGCCGCGCAGCAGCCCAAGGCGCCGAAATCCGCCAACAAGCCGGCGGCGCAGAAACAGAACCGCCGCCCGGCCAAACCGCGCCGCCAGGGAGGGGGAGAGCACCAGCCCCAAGGGGCGCATGCCCACGAGTCCCAGCTGGCGCGCGTCGGGCGTGGCCGCTAG
PROTEIN sequence
Length: 522
MTAELETTSHASSQGPAESSASPKEGKGASGRSRGGRKLRTPFRRRRGDAQGETPPAEQAQAVDAGPAEEADRALSYLGDHQTRQRLDRYLNSDALMPKLHKVLAEAGIGSRRDMEELIVAGRVSVNGEPAHVGQRVGPNDKVRVNGRLVSRPKAGKLPRVILYHKPAGEIVSHDDPEGRATVFARLPRIRSGKWLSVGRLDLNTEGLLILTTSGELANRLSHPRYGAEREYAVRVLGELADEKQTELTTGIQLEDGQAQFNSLDYIGGEGSNRWYRVTLSEGRNREVRRMFLAAGVTVSRLIRTRFGDVILPSNLRRGRWEELDEQLVGALMVQLGLIRTGDDDADGQVERQPLSHASALPPGFGTPGQNGQNGARLNRRGRVSGGRGKASIDPFTTGLLISGGLANGHPDGGKQHASPKPHHKSKPSKAGGHAGRPGKAGKPSRPQPEGQQRSREPKARVRSASGDAAQQPKAPKSANKPAAQKQNRRPAKPRRQGGGEHQPQGAHAHESQLARVGRGR*