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SCNpilot_solid_1_scaffold_11_118

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 126547..127716

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KVX1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 389.0
  • Bit_score: 577
  • Evalue 7.50e-162
  • rbh
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17808.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 389.0
  • Bit_score: 579
  • Evalue 4.70e-162
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 389.0
  • Bit_score: 574
  • Evalue 2.30e-161

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAAGAACATAAAGCATCTGATTGGCTGCGGGCTGGCCGTCGCTTCCCTGGTGTCTGTTCCGTGCCTGACGGCGCAGGCCCGGGACCTGAAAGTCGGGTTGAGCGTTTCCCTGTCGGGGCCGAATTCGTCCATCGGCGTGCCTTATTCCAAGGGGCTGAAGGCCGGGCTGGCCTACCAGGACCAGGTGGAGGGCCGCAAGATACAGCTCATCGTGCTCGACGACGGCTCGGATCCCTCCACGGCGGGGCGCAATGCCCGCAAGCTGGTGAACGAGGACAAGGTGGACGTGCTGATCGGCACGTCGGGCGTGCCTTCGGCCATCGCCATGGCGCAGGTGGGCCGTGACGCCGGAGTGCCCATGATCGGGGTGACGCCCATCTCGGTGGATCCGGCCAAGAATCCCTGGGTGATGACGGTTGCCCAGCCGACCCAGCTCATGGTCGATGCGGTGGTGGATCGCATGAGCAAGGACGGCGTCAAGACGGTGGGCTATATCGGCTTCTCCGATGCCTGGGGCGATCTGGTCCACGACGCCCTGGCGAAGGCCAGCGGCAAGGCCGGCATCCAGGTGGTGGATGACGAGCGCTACGCGCGTTCGGATGCCTCCGTGATGGGGCAGGTCCTGCGCCTGCTGTCCAAGCGTCCGGATGCCGTGATGACCGGCGGCGCGGGCACGCCCGGCGCCCTGCCGTTCCTGGCGCTGGCCGAACGAGGCTATCGGGGCAAGGTCTATGGCCAGCACGGCCTGATCAACGCCGACTTCGTCCGGGTCGTGGGGGCCGCCGGCAATGGCGCCATCATGCCGACGGGACCGGTGATCGTCGCCGAACAATTGCCCGACGACTATCCGACCAAGAAGATCGCTCTCGAATTCCGCGACATCTACCAGAAGGTCAATCACGAGCCCACCACCGACGCCTTCTCAGCGTATGCCTTCGATGGCTGGCTCGTGTTTCTCGACGCGGCGCGCCGGGCCATGGACAAGACGGGGGCCGAACCCGGCACGCCGGCTTTCCGCACCGCCTTGCGCGACGCCATTTTCTCAACCAAAGAGCTGGTCGGCACCCACGGCGTCTACAACCTGAAGCCCGGGGAACTGACCGGCGTGGACGCGCGGGCCCGTGTGATCGTCGAATTGCAGGACGGCCGCTGGAAGCTGGCCCCCTGA
PROTEIN sequence
Length: 390
MKNIKHLIGCGLAVASLVSVPCLTAQARDLKVGLSVSLSGPNSSIGVPYSKGLKAGLAYQDQVEGRKIQLIVLDDGSDPSTAGRNARKLVNEDKVDVLIGTSGVPSAIAMAQVGRDAGVPMIGVTPISVDPAKNPWVMTVAQPTQLMVDAVVDRMSKDGVKTVGYIGFSDAWGDLVHDALAKASGKAGIQVVDDERYARSDASVMGQVLRLLSKRPDAVMTGGAGTPGALPFLALAERGYRGKVYGQHGLINADFVRVVGAAGNGAIMPTGPVIVAEQLPDDYPTKKIALEFRDIYQKVNHEPTTDAFSAYAFDGWLVFLDAARRAMDKTGAEPGTPAFRTALRDAIFSTKELVGTHGVYNLKPGELTGVDARARVIVELQDGRWKLAP*