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SCNpilot_solid_1_scaffold_28_174

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(168791..169072)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RS17_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 91.0
  • Bit_score: 149
  • Evalue 1.60e-33
SSU ribosomal protein S17p similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 93.0
  • Bit_score: 176
  • Evalue 2.60e-42
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 93.0
  • Bit_score: 176
  • Evalue 1.30e-41

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGACAGCCGAAATCCAAAAAGACACCGCCAAGCGTCAACGCACGCTGGTCGGCAAGGTCGTCAGCAACAAGATGGACAAGACGGTCGTCGTCAGCGTCCAGACCCGCGTGAAGCACCCCGTGCTGGGCAAGTTCGTCAACCGCACCGCCAAATACAAGGCGCATGACGAATCCAACCAGTACAACGAGGGCGATACCGTGGAAATCGCCGAAGGTCGTCCCATCTCCAAGTCCAAGTCCTGGACGGTGGTGCGCCTGATCGAGGCCGTGCGCATCATCTGA
PROTEIN sequence
Length: 94
MTAEIQKDTAKRQRTLVGKVVSNKMDKTVVVSVQTRVKHPVLGKFVNRTAKYKAHDESNQYNEGDTVEIAEGRPISKSKSWTVVRLIEAVRII*