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SCNpilot_solid_1_scaffold_73_8

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(7910..8962)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VIC0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 355.0
  • Bit_score: 458
  • Evalue 7.80e-126
  • rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJM99729.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspiri similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 355.0
  • Bit_score: 458
  • Evalue 1.10e-125
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 349.0
  • Bit_score: 448
  • Evalue 1.70e-123

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
GTGAATAGCGATCAGCCATCTTCTCCTCGCCGGCGCCCCGGCATCCGTGAAATCGCCCAGGCGGCCGGGGTCTCCACCGCCACGGTCGATCGCGTCCTGAACCAGCGCCCCGGCGTGCGGGCGGCCACCGTGCAGGCCGTCTTCCAGGCGGCGGCCGATCTGCGCTACCTGCCGCAGGCGGACCTGTATCGGGCGCTGCAGCCCCACCCCATGCGCCTGCTGTTCCTGCTGCCGGCCGGCACCAACCGCTACCTGAACATGCTGGGGGATTACGCCGGCGCCGCGCACGACCACACGGACCCGTTCAACGTGCAGTGCCGCAGCCGCTTCGTCGAAGGCTTCGACCCCCACATCCTGGCCGACACCCTGCTGCGGGAAGGCAGGCGCGCCGACGGCATCGCCTTCATGGCGCTGGAACACCCGGTGGTGCGCGAAGCCGTCAACCAACTGGCCGAGCGGGGCGTGCACACCATCACCCTGATTTCCGACCTGTCCCGGTCCGCGCGCTGCGCCTACGTCGGGCTGGACAACCGGGCGGCGGGCCGCAGCGCCGGCCTGCTGATGGGCCGCTTCATCGGCGCGCGCCCGGGGCGCGTCGCCATGATCGCCGGCAGCCGTCATTACCGCGGCCACGAGGAACGCGAAATGGGTTTCCAGGACGTGCTGTACGAAAAATTTCCTGGATTGCAGGTGGTCGGCCTGAAGGAAGGCCACGACGACGCGGCCACCAACTACCGCCAGGCCCGCCAATTGCTGGACCAGCACCCGGACCTGGCCGGCATCTACAACATCGGCGGCGCCTCCGACGGCGTCGGCAAGGCCCTGAAGGACGCCCGCAGGGACCAGGACATCGTCTTCATCGGCCACGGCCTGACCCCCGACACTCGCAGCCTGCTGATCGACGGCACCATGGACGCGCTGCTGAACCAGAACCTGCAGTCGACCATCCTGTCGGCCGTGCGCATCTTCGCCAACGTCCGCGCCGGGCGCGAGCCCATGGCGGGCATCGAACCGATGCAGATCAGCGTGGTGTTCAGCGAGAATTTGCCGTGA
PROTEIN sequence
Length: 351
VNSDQPSSPRRRPGIREIAQAAGVSTATVDRVLNQRPGVRAATVQAVFQAAADLRYLPQADLYRALQPHPMRLLFLLPAGTNRYLNMLGDYAGAAHDHTDPFNVQCRSRFVEGFDPHILADTLLREGRRADGIAFMALEHPVVREAVNQLAERGVHTITLISDLSRSARCAYVGLDNRAAGRSAGLLMGRFIGARPGRVAMIAGSRHYRGHEEREMGFQDVLYEKFPGLQVVGLKEGHDDAATNYRQARQLLDQHPDLAGIYNIGGASDGVGKALKDARRDQDIVFIGHGLTPDTRSLLIDGTMDALLNQNLQSTILSAVRIFANVRAGREPMAGIEPMQISVVFSENLP*