ggKbase home page

SCNpilot_solid_1_scaffold_73_29

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(34509..34793)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer transmembrane protein TrbD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GX43_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 6.10e-41
trbD; conjugal transfer transmembrane protein TrbD similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 1.70e-41
Conjugal transfer transmembrane protein TrbD {ECO:0000313|EMBL:AEI81913.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 8.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAATACTGACATCGAAGGCGTATCCAGCTTCGCTGCGGGGTTTGAGGTGCCGCTGCACCGTTCGCTGACCGAACCGATTTTGATGGGCGGCGCACCGCGTACCGTTGCGATTGCCAACGGCACGCTGGCCGCCGCCGTGGGGCTGGGCCTGCAACTGTGGATTCCAGGTGTGGTGCTCTGGATTGTCGGTCATTCTCTGGCGGTATGGGGCGCGCGTGTTGACCCGCAGTTCATGCAGGTTTTTTCCCGTCACATCAAACATAAAACGCTGCTGGACGTGTAG
PROTEIN sequence
Length: 95
MNTDIEGVSSFAAGFEVPLHRSLTEPILMGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSLAVWGARVDPQFMQVFSRHIKHKTLLDV*