ggKbase home page

SCNpilot_solid_1_scaffold_73_80

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(87941..89563)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 550.0
  • Bit_score: 421
  • Evalue 1.20e-114
Methyl-accepting chemotaxis protein I similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 533.0
  • Bit_score: 718
  • Evalue 1.80e-204
  • rbh
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:CDM25204.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 533.0
  • Bit_score: 718
  • Evalue 9.10e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1623
ATGCGCAATCTGAAAATCAGCACCCGACTGACCCTGAGCTTCAGTTTCGTGGTGATCCTGCTGTTGATCCTGTCGGGCATCGGCGCCTGGCGCATCCTGGACTCGCAGCGGGACAACCGCGAACTGGGCTACCGCCTGCAGACCAACGATCTGCTGCAGCAGCTGACCCGCCAGGTCGGCATCAACGCCAATCAGACCCAGGCCACCCTGGCGGCGGACCCGGACACGCTGCGCAAGCTGAAGGCCTCGATCCAGGCATCCGACGAACAGGCGCGGAAAATCAGCCGCCAGCTGGCCGACCTGCTGAACGGCCCGGAATCCGCCGCCCTGCTGCAACAGGCGGCGCAGGACCGGGCCGCCTACCTGCAAAGCCGCAACCAGGCCTTCAAGGACCTGGACGGCGGCAACTATGGCGAAGCCGACGCCTTCTTCAATCAGCAACTGCCGAAGATGACGGCGGGCTATCTGGCGCGGATCGACCAGTTGTCGCAACGCCAGAACGATTCCGTGCAGCAGCTGTTCGACCAGAGCGCCCGGTCCAGCGAACTGGGGCTGGCCGTCCTGGCCATCGCCACCTTGCTGGCCCTGATCCTGGCGCCGCTGTTCGCCTGGCGCGTCACCCGGTCCATCATCCGGCCGCTGCGCCATGCCGTCAGCCTCGCGGGCGCCGTGGCGCAACGCCGGCTGACCGTGCGCATCCGCGCCCAGGGCCGCGATGAAATCGGCGAACTGCTGACGGCGCTGGGCGCCATGGCCGACAATCTGCGCCAGGCCGTGGGAGAAGTGCGCGGCAGTTCCAACGCCATCGCGACAGCCTCCGCGCAGATCACGGAAGGCAACCTGGATCTATCGTCGCGCACCGAACAGCAGGCCGGCTCCCTGGCGCAGACCGCCGCCACCATGGAAGAAATCACCGCCACCGTGCGCCAGAGCGCCGACAACGCCCGACAGGCCAATGCCCTGGCCGAATCCGCCGCCCGGACCGCCTCCGACGGCGGCGCCATCGTGACCGAACTGGTGGGCACCATGGACGAGATCAACGGCAAATCCCAGCAGGTCGCCGATATCGTCGGCGTGATCGATTCCATCGCCTTCCAGACCAACATCTTGGCGCTGAACGCCGCCGTCGAGGCCGCCCGCGCCGGCGAACAGGGCCGCGGCTTCGCCGTGGTCGCCGCCGAAGTCCGGGCGCTGGCCCAGCGGTCGGCCGGCGCCGCCAAGGAAATCAAGGCCCTGATCGACACCTCCGTCGAAGCCACCGCCAAGGGCAACGAGCAGGCCGCCCGCGCCGGCGCCACCATGAAGAACATCGTCGACAGCATCAATCGCGTCACCGGCATCATGGGCGAAATCAACGCCGCCAGCCGCGAACAGACCACCGGCATCGAGGAAATCAATTCCGCCATGACGCAGATGGACGGCGTCACCCGCCAGAACGCCGGCCTGGTGGAAGCGTCCGCCGCAGCCGCCACCAGCCTGCGCAGGCAGGCCGACGCCCTGGCCGACCTGGTGGCGACCTTCACGCTGGACGATGAAAATGCCGCGCCCGAAGAAGCCCCCGCGGTCCGACCGGCTGCGGCGATCGGAGGGCATCCCGGAAAACTCTTGCTTGCGCAGCAATGA
PROTEIN sequence
Length: 541
MRNLKISTRLTLSFSFVVILLLILSGIGAWRILDSQRDNRELGYRLQTNDLLQQLTRQVGINANQTQATLAADPDTLRKLKASIQASDEQARKISRQLADLLNGPESAALLQQAAQDRAAYLQSRNQAFKDLDGGNYGEADAFFNQQLPKMTAGYLARIDQLSQRQNDSVQQLFDQSARSSELGLAVLAIATLLALILAPLFAWRVTRSIIRPLRHAVSLAGAVAQRRLTVRIRAQGRDEIGELLTALGAMADNLRQAVGEVRGSSNAIATASAQITEGNLDLSSRTEQQAGSLAQTAATMEEITATVRQSADNARQANALAESAARTASDGGAIVTELVGTMDEINGKSQQVADIVGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSAGAAKEIKALIDTSVEATAKGNEQAARAGATMKNIVDSINRVTGIMGEINAASREQTTGIEEINSAMTQMDGVTRQNAGLVEASAAAATSLRRQADALADLVATFTLDDENAAPEEAPAVRPAAAIGGHPGKLLLAQQ*