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SCNpilot_solid_1_scaffold_531_6

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4708..5601

Top 3 Functional Annotations

Value Algorithm Source
Quinate/shikimate 5-dehydrogenase I delta (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 293.0
  • Bit_score: 454
  • Evalue 2.70e-125
  • rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000313|EMBL:CDM22618.1};; TaxID=14 similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 293.0
  • Bit_score: 454
  • Evalue 1.30e-124
Shikimate dehydrogenase n=4 Tax=Ralstonia solanacearum RepID=M4V423_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 291.0
  • Bit_score: 344
  • Evalue 1.10e-91

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCGACTCACCACTGAAAAACCCGCCCTGCTGCTTGGCCTGATCGGAGAAGGGATCCGCGAATCCCTCAGTCCGACCCTGTACGAAGACGAGGCCGCCCATCACGGCATCCTGTGCCTCTACCAGCGCATCGACCTGGACGCCCTGCGCCTGACCCCCGCCGCCCTGCCGGAACTCCTCACCTCGGCGGAACGGCTGGGATTCACCGGGCTCAACATCACGCACCCCTGCAAGCAGGCGGTCATCGGGCACCTGGACGAACTCTCGGACGAGGCGCGCGCCATCGGCGCCGTCAACACCGTCGTGCTGCGCGACGGCCGGCGCATCGGCCACAACACCGACCACTACGGCTTCACGCGGAACATGCAGCGGCACATGGCCGGCCGCGCGCTCGGGCATGTCGTCCAGCTGGGCGCGGGCGGCGCCGGGGCGGCGGTGGCCGACGCGGTCCTGCGCCTGGGAGCCAGCCGCCTGACGCTCTTCGACCTGTCGACGGAACGGGCGCGGGATCTGGTCCGGACGCTGCGGGCGCGCTTTCCGGACGCCGCCGTCGAAACCGGCGGCGACCCGGCCGAGGCCATGCGGCAAGCGGACGGCCTGGTCAACGCCACGCCGATCGGCATGGCCAGCCACCCGGGCACGCCGCTGCCGCCGGAACTGCTGGAGCCCCGGCACTGGTTCGCGGAGATCATCTATTTCCCGCTGGAAACCGAACTGCTGCGGATCGCCCGCGCCAAAGGCTGCCACACCATCGACGGCATCGGCATGGTCGTGCACCAGGCCGCGCGCGCCTTCGAGCTCTACACCGGCGGCATTCCCGCCGACAGCGCGCGCATGACCGACCATGTCACCCAGGTCCTGAAACGCCGGGCGGCCGCCCGCCAGGGCTGCTGA
PROTEIN sequence
Length: 298
MRLTTEKPALLLGLIGEGIRESLSPTLYEDEAAHHGILCLYQRIDLDALRLTPAALPELLTSAERLGFTGLNITHPCKQAVIGHLDELSDEARAIGAVNTVVLRDGRRIGHNTDHYGFTRNMQRHMAGRALGHVVQLGAGGAGAAVADAVLRLGASRLTLFDLSTERARDLVRTLRARFPDAAVETGGDPAEAMRQADGLVNATPIGMASHPGTPLPPELLEPRHWFAEIIYFPLETELLRIARAKGCHTIDGIGMVVHQAARAFELYTGGIPADSARMTDHVTQVLKRRAAARQGC*