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bjp_ig2103_scaffold_260_curated_6

Organism: BJP_Ig2103_Hor_218_2014_Dechloromonas_63_51_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(3955..5928)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IP8_DECAR similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 657.0
  • Bit_score: 1158
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 657.0
  • Bit_score: 1158
  • Evalue 0.0
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 657.0
  • Bit_score: 1158
  • Evalue 0.0
  • rbh

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Taxonomy

Dechloromonas aromatica → Dechloromonas → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGGCTAAGGCAAAAGACACCGCGAAGGAAGCTCCGAAGGCTCGCATCAGCAAAGCCAAGGAGAAAGCTGCCGAAAAGGCGCTGCTCGAAGGCGCGATGGCAGAGACTCCAGAGCCGCTCGATGCCGAAGCGCGCAAGATGCGCCTGAAGGCGCTGATCAAGCTCGGCAAGGAACGCGGCTACCTGACTTACGCCGAAATCAACGACCATCTGCCGGATGACGTCGTCGATGCGGAAAGTATCGAAGCGATCATTTCGACCTTCAGCGAAATGAGCATCCAGGTCTTCGACGAAGCGCCCGCTGCCGAAGATCTGCTGATGTCAGACACGACCGCCTCCGCCGCCGACGACGAGGAAGTCGAAGCACAAGCCGAGCAGGCCCTGTCCACGGTCGATTCCGAATTCGGCCGGACCACCGACCCAGTGCGCATGTACATGCGCGAAATGGGCTCGGTCGAACTGCTCACCCGCGAAGGCGAAATCGAGATCGCCAAACGCATCGAGGAAGGCCTCAAGCACATGGTGCAGGCCATCTCCGCCTGCCCGACGACCATCGCCGACATCCTCGACTCCGCCGCCAAGGTCGAAGCCGATGAAATGCGCATCGACGAACTGGTTGACGGTCTGATTGATCCGAATGCCGTCGTCGCCGAACCGGCGGCTGAAGTGCCGGAAGAGGAAGAAGCCAGCGAAGACGAGGAATCCGAGGACGAGGAAGGCAGCGGCGCAGCAGCCGTTTCCGCCTCCCTGCTGCAGCTGAAGGCTGATGCCCTGGAACGCTTCGCGGTCATCCGTGCGCTGCACGCCAAGATGCAAAAGGCCCTCTCCAGCAAGGGTTCGCAGGATAAGACCTACCTCAAGTTGCAGCAGCAGATTTCCGACGAGCTGATGAACATCCGCTTCACCTCGCGCTCCATCGAGCGCCTGTGTGACAGCGTGCGCGGCATGGTCGAGCAGGTCCGCGGCTCCGAGCGCAAGATCCAGCAACTCTGTGTCGAACGCGTCAAGATGCCGCGCCAACAGTTCATCCAGTCCTTCCCGGGCAACGAAGTGAACCTCGACTGGGTCGATGGCGAAATCACCTCGGCGCCGAAGAGCTACGTTGCCATCCTCACGCGCAGCGCTCCCGATATCAAGGAACAGCAGAAGAAACTGCTCGCCCTGCAGGATCACATCGGCATCCCGCTGAAGGAACTCAAGGACATCAACAAGCAGATGTCCACCGGCGAAGCCAAGGCCCGCCGCGCCAAGCGTGAAATGACCGAAGCCAACCTGCGCCTGGTCATCTCCATCGCCAAAAAGTACACCAACCGTGGCCTGCAGTTCCTTGACCTGATCCAGGAAGGCAACATTGGTCTGATGAAGGCCGTGGACAAGTTCGAATACCGCCGTGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATCCGTCAGGCCATCACCCGCTCCATCGCCGACCAGGCGCGGACCATCCGTATCCCGGTGCACATGATCGAAACGATCAACAAGATGAATCGGATCAGCCGCCAGATCCTGCAGGAAACCGGCTCCGAGCCGGATCCGGCAACCCTGGCGAAGAAGATGGACATGCCGGAAGACAAGATCCGCAAGATCATGAAGATTTCCAAGGAGCCAATCTCCATGGAAACCCCGATCGGCGACGACGACGACTCCCATCTCGGCGACTTCATCGAGGACCAGGGCACCCTGGCGCCGGCCGATGCAGCGATGTACTCGAGCCTGCGCGGCGTCACCAAGGAAATTCTCGACACGTTGACGACCCGCGAAGCCAAGGTCCTGCGCATGCGTTTCGGCATCGAAATGAACACCGATCACACGCTGGAGGAAGTCGGCAAGCAGTTCGACGTCACCCGCGAGCGCATCCGTCAGATCGAAGCCAAGGCCCTGCGCAAATTGCGTCACCCGAGCCGTTCCGACAAGCTGCGCAGCTTCATCGACAGCAACAACAACTAA
PROTEIN sequence
Length: 658
MAKAKDTAKEAPKARISKAKEKAAEKALLEGAMAETPEPLDAEARKMRLKALIKLGKERGYLTYAEINDHLPDDVVDAESIEAIISTFSEMSIQVFDEAPAAEDLLMSDTTASAADDEEVEAQAEQALSTVDSEFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEEGLKHMVQAISACPTTIADILDSAAKVEADEMRIDELVDGLIDPNAVVAEPAAEVPEEEEASEDEESEDEEGSGAAAVSASLLQLKADALERFAVIRALHAKMQKALSSKGSQDKTYLKLQQQISDELMNIRFTSRSIERLCDSVRGMVEQVRGSERKIQQLCVERVKMPRQQFIQSFPGNEVNLDWVDGEITSAPKSYVAILTRSAPDIKEQQKKLLALQDHIGIPLKELKDINKQMSTGEAKARRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGSEPDPATLAKKMDMPEDKIRKIMKISKEPISMETPIGDDDDSHLGDFIEDQGTLAPADAAMYSSLRGVTKEILDTLTTREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDKLRSFIDSNNN*