ggKbase home page

SCNpilot_solid_1_scaffold_1217_17

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 18280..18741

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375FAF4 similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 155.0
  • Bit_score: 240
  • Evalue 8.60e-61
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJL40056.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 155.0
  • Bit_score: 232
  • Evalue 3.30e-58
translation initiation inhibitor, yjgF family similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 155.0
  • Bit_score: 225
  • Evalue 1.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGACCGTGACGCAGACGCTCGCCGAGCTGGGCATCGAGCTTCCCGATGTGGTGCCGCCGGTCGCCGCGTACGTCCCCGCCGTCGTGCACGGCGACCTCGTCTACACGGCCGGCCAGCTGCCGATGAGCGGAGGACGGCTTCCCGCCACCGGCAAGGTGGGCGGTGAGGTGTCGGCCGACGACGCGAAGGCGTACGCACGCCAGTCCGCGCTGAACGCGATCGCCGCCGCCGCGGCCGTCGTGGGCGGGGTGGACCGGCTCACCGGTGTCGTGAAGGTCGTCGGGTTCGTGGCATCCACGCCCGATTTCACGGGACAGCCGGGCGTCATCAACGGCGCCAGCGAACTGCTCGGCGACGTGTTCGGCGAGGCCGGGCGGCACGCCCGTTCGGCGGTGGCGGCCCCCGTGCTGCCGCTGGACTCGCCCGTCGAGGTCGAGGTGATCTTCCGCTTCGCTCGCTGA
PROTEIN sequence
Length: 154
MTVTQTLAELGIELPDVVPPVAAYVPAVVHGDLVYTAGQLPMSGGRLPATGKVGGEVSADDAKAYARQSALNAIAAAAAVVGGVDRLTGVVKVVGFVASTPDFTGQPGVINGASELLGDVFGEAGRHARSAVAAPVLPLDSPVEVEVIFRFAR*