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SCNpilot_solid_1_scaffold_4124_11

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 10615..10950

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EAA8F similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 110.0
  • Bit_score: 184
  • Evalue 5.30e-44
PadR family transcriptional regulator {ECO:0000313|EMBL:KHK97977.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrov similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 110.0
  • Bit_score: 181
  • Evalue 6.30e-43
transcriptional regulator PadR family protein similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 109.0
  • Bit_score: 173
  • Evalue 2.60e-41

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GTGAGCGAGAACGAGATCCTCGAGACGCATCTGCAGGAGCTGCGGCGTGGCACGGTGGTGCTGGCCTGCCTGCGGCTGCTGGTCGAACCCGGGTACGGATACGGCCTGCTCGAAGAGCTCGGCCGCCGAGGCTTCCCCACGGATGCGAACACCCTCTATCCGCTGCTGCGCCGCCTCGAGAAGCAGGGGTACCTCGACAGCGAGTGGAACACCGACGAGGCCCGACCCCGCAAGTTCTATCGCACGAACCGTGCCGGCATCGTCCTCGCCGACGCGCTCACCACCGACTTCCAGGCGATCGCCACGGCGATCGCCGCTCTCTCCGAGGAGGACTGA
PROTEIN sequence
Length: 112
VSENEILETHLQELRRGTVVLACLRLLVEPGYGYGLLEELGRRGFPTDANTLYPLLRRLEKQGYLDSEWNTDEARPRKFYRTNRAGIVLADALTTDFQAIATAIAALSEED*