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SCNpilot_solid_1_scaffold_4124

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4124_1
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
ResB family protein {ECO:0000313|EMBL:EZP28126.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_solid_1_scaffold_4124_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179..1237
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003151C18 rbh
Cytochrome c biogenesis protein CcsA {ECO:0000313|EMBL:KJL36147.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengis
ABC transporter
SCNpilot_solid_1_scaffold_4124_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1415..1870
DNA (456bp) protein (152aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L435_9ACTO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KHD78215.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
SCNpilot_solid_1_scaffold_4124_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1863..2864
DNA (1002bp) protein (334aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGR7_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KJQ55542.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
SCNpilot_solid_1_scaffold_4124_5
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2861..3319
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KYA5_9MICO
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94195.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
SCNpilot_solid_1_scaffold_4124_6
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3355..5361)
DNA (2007bp) protein (669aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NG40_MICTS
Putative membrane protein {ECO:0000313|EMBL:EZP28123.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCNpilot_solid_1_scaffold_4124_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5358..8252)
DNA (2895bp) protein (965aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F9792 rbh
Transporter {ECO:0000313|EMBL:KHK98052.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
drug exporters of the RND superfamily
SCNpilot_solid_1_scaffold_4124_8
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8389..9045
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003769D27
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_solid_1_scaffold_4124_9
unknown

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9295..9450
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_4124_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9473..10468)
DNA (996bp) protein (332aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374D45B rbh
menC; L-alanine-DL-glutamate epimerase
SCNpilot_solid_1_scaffold_4124_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10615..10950
DNA (336bp) protein (112aa)
PadR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EAA8F
PadR family transcriptional regulator {ECO:0000313|EMBL:KHK97977.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrov
transcriptional regulator PadR family protein
SCNpilot_solid_1_scaffold_4124_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10952..11965
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363A469 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK97978.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_solid_1_scaffold_4124_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11970..12752
DNA (783bp) protein (261aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium yannicii RepID=UPI000312F38A rbh
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KHK97979.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCNpilot_solid_1_scaffold_4124_14
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13283..14245
DNA (963bp) protein (321aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1263625 spec
menB; naphthoate synthase (EC:4.1.3.36)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000319F2B4 rbh
SCNpilot_solid_1_scaffold_4124_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14361..15611
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003631B70 rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:KHK97984.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
SCNpilot_solid_1_scaffold_4124_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15681..16640
DNA (960bp) protein (320aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A14F3 rbh
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
SCNpilot_solid_1_scaffold_4124_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16657..16950)
DNA (294bp) protein (98aa)
Small-conductance mechanosensitive channel n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKU3_9MICO
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAD33760.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp
small-conductance mechanosensitive channel
SCNpilot_solid_1_scaffold_4124_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17023..17226
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000314839B
Membrane protein {ECO:0000313|EMBL:KIC56601.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Displaying 18 items

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