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SCNpilot_solid_1_scaffold_7806_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1..807

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 268.0
  • Bit_score: 473
  • Evalue 1.90e-130
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469449 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 266.0
  • Bit_score: 465
  • Evalue 2.90e-128
rlu; pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 266.0
  • Bit_score: 451
  • Evalue 2.10e-124

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GGAGGCGTGAGCTCGGGTGGACGCGTGCTGGGCAAGTCGGACCGGCTGCACGCGGGATCCTGGCTCGAGGTCGTGTGGTCGCCCAAGGCCGAGCCCGTGGTCGTGCCTGTCGCCGTCCCCGACCTCGGCATCGTGCACAGCGACGACGACATCGTCGTGGTGGACAAGCCCGCGGGTGTGGCCGCGCATCCGTCGCTGGGCTGGGAGGGACCGACGGTGCTCGGCGCCCTTGCCGCCGCCGGCTTCCAGATCGCGACCAGCGGTCCCGCCGAGCGTCAGGGGATCGTGCATCGCCTGGATGCCGGGACCAGCGGGCTGATGGTGGTCGCCTCCAGCGAACGCGCCTACGTCGCCCTCAAGCACGCCTTCAAGCAGCGCACGGTCGAGAAGATCTATCACGCCGTGGTGCAGGGCCATCCCGACCCGCTGGCGGGCACCATCGACGCGCCCATCGGCCGGCACCGCTCGCACCCGTGGAAGTTCGCCGTCACGCCCGACGGCAAGGACTCGGTCACGCATTACGAGACCATCGAGGCGTTCCGCGGGGCATCGCTGCTGGAGATCCATCTCGAGACCGGGCGCACCCACCAGATCCGTGTGCACATGGCCGCGCACCGCCATCCGTGCGTCGGCGACCCGCTGTACGGCGCCGACCCCACGCTCTCGGCGCACCTGGGGCTGTCCCGCCAGTGGCTGCACGCGCACCGACTCGCCTTCGCGCACCCCGGCACCGGCGAGTGGATGTCGTTCACCTCGCCGTATCCGGCGGATTTCCAGCACGCGCTCGACCTCCTGCGCGGCCAGTAG
PROTEIN sequence
Length: 269
GGVSSGGRVLGKSDRLHAGSWLEVVWSPKAEPVVVPVAVPDLGIVHSDDDIVVVDKPAGVAAHPSLGWEGPTVLGALAAAGFQIATSGPAERQGIVHRLDAGTSGLMVVASSERAYVALKHAFKQRTVEKIYHAVVQGHPDPLAGTIDAPIGRHRSHPWKFAVTPDGKDSVTHYETIEAFRGASLLEIHLETGRTHQIRVHMAAHRHPCVGDPLYGADPTLSAHLGLSRQWLHAHRLAFAHPGTGEWMSFTSPYPADFQHALDLLRGQ*