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SCNpilot_solid_2_scaffold_112

Search features with annotation key words

Displaying items 31-60 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_112_31
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32651..34294)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D4_9BRAD rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=666684 speci
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL rbh
SCNpilot_solid_2_scaffold_112_32
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34346..34642)
DNA (297bp) protein (99aa)
10 kDa chaperonin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D5_9BRAD
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=666684 speci
groES1; co-chaperonin GroES; K04078 chaperonin GroES
SCNpilot_solid_2_scaffold_112_33
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34931..35431
DNA (501bp) protein (167aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D6_9BRAD rbh
Putative lipoprotein {ECO:0000313|EMBL:EFI51146.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
lipoprotein
SCNpilot_solid_2_scaffold_112_34
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35498..36700
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D7_9BRAD rbh
Oxalate/formate antiporter family transporter {ECO:0000313|EMBL:CEG09371.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
putative MFS transporter protein rbh
SCNpilot_solid_2_scaffold_112_35
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36758..37522)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK75_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29506.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K03414 chemotaxis protein CheZ rbh
SCNpilot_solid_2_scaffold_112_36
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37819..38568
DNA (750bp) protein (250aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7D9_9BRAD rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFI51149.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
ErfK/YbiS/YcfS/YnhG family protein rbh
SCNpilot_solid_2_scaffold_112_37
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38646..39443)
DNA (798bp) protein (266aa)
Putative periplasmic ligand-binding sensor protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09368.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein; K09945 hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_38
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39567..40400)
DNA (834bp) protein (278aa)
YdjC family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E1_9BRAD rbh
YdjC family protein {ECO:0000313|EMBL:EFI51151.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K03478 hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40397..41446)
DNA (1050bp) protein (350aa)
bactoprenol glucosyl transferase (EC:2.4.1.-) rbh
Glycosyl transferase family 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09366.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
SCNpilot_solid_2_scaffold_112_40
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41526..42503)
DNA (978bp) protein (326aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] rbh
ATP phosphoribosyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E3_9BRAD rbh
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
SCNpilot_solid_2_scaffold_112_41
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42500..43639)
DNA (1140bp) protein (380aa)
tRNA synthetase class II (G H P and S) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E4_9BRAD rbh
tRNA synthetase class II (G H P and S) {ECO:0000313|EMBL:EFI51154.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ; K02502 ATP phosphoribosyltransferase regulatory subunit rbh
SCNpilot_solid_2_scaffold_112_42
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43719..44504)
DNA (786bp) protein (262aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] rbh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E5_9BRAD rbh
SCNpilot_solid_2_scaffold_112_43
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44962..45363
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NG87_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29497.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_44
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45399..46334
DNA (936bp) protein (312aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
4-hydroxybenzoate-octaprenyl transferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] rbh
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK66_AFIFE rbh
SCNpilot_solid_2_scaffold_112_45
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46348..46713)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51158.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_46
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47152..48573
DNA (1422bp) protein (474aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E9_9BRAD rbh
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:EFI51159.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
TldD/PmbA family protein; K03592 PmbA protein rbh
SCNpilot_solid_2_scaffold_112_47
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48560..49378
DNA (819bp) protein (273aa)
hypothetical protein; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
Inositol monophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F0_9BRAD rbh
Inositol-1-monophosphatase {ECO:0000313|EMBL:CEG09356.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
SCNpilot_solid_2_scaffold_112_48
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49420..49668
DNA (249bp) protein (83aa)
Inositol monophosphatase family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09355.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_112_49
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49704..50378
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09354.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein; K09778 hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_50
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50371..51669
DNA (1299bp) protein (433aa)
waaA; 3-deoxy-D-manno-octulosonic-acid transferase WaaA (EC:2.4.-.-); K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] rbh
Three-deoxy-D-manno-octulosonic-acid transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F3_9BRAD rbh
Three-deoxy-D-manno-octulosonic-acid transferase domain protein {ECO:0000313|EMBL:EFI51163.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afip
SCNpilot_solid_2_scaffold_112_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51669..52679
DNA (1011bp) protein (337aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
lpxK; tetraacyldisaccharide 4'-kinase LpxK (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] rbh
Tetraacyldisaccharide 4'-kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F4_9BRAD rbh
SCNpilot_solid_2_scaffold_112_52
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52683..52910)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09351.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_112_53
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53010..54821)
DNA (1812bp) protein (604aa)
Copper-containing nitrite reductase AniA {ECO:0000313|EMBL:AEI05588.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AEI05588.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
aniA1; copper-containing nitrite reductase AniA (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] rbh
Copper-containing nitrite reductase n=2 Tax=Oligotropha carboxidovorans RepID=B6JIX6_OLICO rbh
SCNpilot_solid_2_scaffold_112_54
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55343..56785)
DNA (1443bp) protein (481aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease 7 large subunit XseA (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] rbh
Exodeoxyribonuclease 7 large subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NG76_AFIFE rbh
SCNpilot_solid_2_scaffold_112_55
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56867..58132
DNA (1266bp) protein (422aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F8_9BRAD rbh
SCNpilot_solid_2_scaffold_112_56
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58132..58578
DNA (447bp) protein (149aa)
GCN5-related N-acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7F9_9BRAD
Aminoalkylphosphonic acid N-acetyltransferase {ECO:0000313|EMBL:CEG09347.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
acetyltransferase
SCNpilot_solid_2_scaffold_112_57
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58591..59037)
DNA (447bp) protein (149aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
CMP/dCMP deaminase zinc-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G0_9BRAD
putative deaminase
SCNpilot_solid_2_scaffold_112_58
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59177..61234
DNA (2058bp) protein (686aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
Pseudouridine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G1_9BRAD rbh
SCNpilot_solid_2_scaffold_112_59
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61236..61793
DNA (558bp) protein (186aa)
methyltransferase (EC:2.1.1.-); K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] rbh
Methyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G2_9BRAD rbh
Methyltransferase {ECO:0000313|EMBL:EFI51172.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_112_60
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61797..63593)
DNA (1797bp) protein (599aa)
DNA mismatch repair protein MutL n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G3_9BRAD rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
mutL; DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL rbh
Displaying items 31-60 of 118 in total

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