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SCNpilot_solid_2_scaffold_112

Search features with annotation key words

Displaying items 61-90 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_112_61
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63672..64088)
DNA (417bp) protein (139aa)
Class I peptide chain release factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G4_9BRAD
Peptidyl-tRNA hydrolase YaeJ {ECO:0000313|EMBL:CEG09342.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
peptidyl-tRNA hydrolase domain-containing protein; K15034 ribosome-associated protein
SCNpilot_solid_2_scaffold_112_62
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64123..65472)
DNA (1350bp) protein (450aa)
Peptidase M16 domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G5_9BRAD rbh
Peptidase M16 domain protein {ECO:0000313|EMBL:EFI51175.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
putative Zn-dependent peptidase rbh
SCNpilot_solid_2_scaffold_112_63
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65469..66866)
DNA (1398bp) protein (466aa)
Peptidase M16 domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G6_9BRAD rbh
Protease 3 {ECO:0000313|EMBL:CEG09340.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillu
peptidase M16 domain-containing protein rbh
SCNpilot_solid_2_scaffold_112_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67001..67741)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51177.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_65
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67823..68323)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase LspA (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G8_9BRAD rbh
SCNpilot_solid_2_scaffold_112_66
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68327..71302)
DNA (2976bp) protein (992aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
Isoleucine--tRNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7G9_9BRAD rbh
SCNpilot_solid_2_scaffold_112_67
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71423..72409)
DNA (987bp) protein (329aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=666684 species="Bacteria; Proteobacter
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] rbh
Riboflavin biosynthesis protein RibF n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7H0_9BRAD rbh
SCNpilot_solid_2_scaffold_112_68
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72612..73004
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7H1_9BRAD
Response regulator receiver protein {ECO:0000313|EMBL:EFI51181.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
cheY; chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY
SCNpilot_solid_2_scaffold_112_69
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73087..73947)
DNA (861bp) protein (287aa)
TIGR01459 family HAD hydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NG60_AFIFE rbh
TIGR01459 family HAD hydrolase {ECO:0000313|EMBL:EKS29472.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 5
hydrolase rbh
SCNpilot_solid_2_scaffold_112_70
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74194..75612)
DNA (1419bp) protein (473aa)
Diguanylate phosphodiesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7H3_9BRAD rbh
Putative membrane protein YjcC {ECO:0000313|EMBL:CEG09330.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
EAL domain-containing protein; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF rbh
SCNpilot_solid_2_scaffold_112_71
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75781..77121)
DNA (1341bp) protein (447aa)
beta alanine--pyruvate transaminase (EC:2.6.1.18); K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18] rbh
Aminotransferase class-III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7H4_9BRAD rbh
Omega-amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:CEG09329.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
SCNpilot_solid_2_scaffold_112_72
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


77703..79316
DNA (1614bp) protein (538aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] rbh
Histidyl-tRNA synthetase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QFD1_9BRAD rbh
SCNpilot_solid_2_scaffold_112_73
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79347..79544
DNA (198bp) protein (66aa)
tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
4-oxalocrotonate tautomerase n=2 Tax=Afipia RepID=D6V7H8_9BRAD
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:CEG09325.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
SCNpilot_solid_2_scaffold_112_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79552..80109)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPM3_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29465.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_75
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80134..80436)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLZ3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29464.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_76
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80642..81088
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51191.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_77
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81182..81883
DNA (702bp) protein (234aa)
Ribonuclease T2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I2_9BRAD rbh
Ribonuclease T2 {ECO:0000313|EMBL:EFI51192.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
ribonuclease rbh
SCNpilot_solid_2_scaffold_112_78
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81966..82829
DNA (864bp) protein (288aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I3_9BRAD rbh
hypothetical protein; K07115 rbh
SCNpilot_solid_2_scaffold_112_79

Not on your lists

82916..83908
DNA (993bp) protein (331aa)
Putative thiosulfate sulfurtransferase, cysA (EC:2.8.1.2)
Putative thiosulfate sulfurtransferase, cysA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS9_THIA3 rbh
Putative sulfurtransferase {ECO:0000313|EMBL:CBH96932.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_solid_2_scaffold_112_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84123..84338
DNA (216bp) protein (72aa)
Cold-shock DNA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09319.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
cspA; DNA binding cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_solid_2_scaffold_112_81
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84411..85040)
DNA (630bp) protein (210aa)
Outer membrane protein Omp31 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I5_9BRAD rbh
Opacity protein antigens {ECO:0000313|EMBL:CEG09318.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
putative outer membrane protein rbh
SCNpilot_solid_2_scaffold_112_82
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85288..87339
DNA (2052bp) protein (684aa)
UvrABC system protein C n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I6_9BRAD rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C rbh
SCNpilot_solid_2_scaffold_112_83
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87423..88034
DNA (612bp) protein (204aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFI51197.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFI51197.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteob
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] rbh
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I7_9BRAD rbh
SCNpilot_solid_2_scaffold_112_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88034..88285
DNA (252bp) protein (84aa)
Molybdopterin converting factor, subunit 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I8_9BRAD
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
moaD; molybdenum cofactor biosynthesis protein MoaD; K03636 molybdopterin synthase sulfur carrier subunit
SCNpilot_solid_2_scaffold_112_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88376..88849
DNA (474bp) protein (158aa)
moaE; molybdenum cofactor biosynthesis protein MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin biosynthesis MoaE protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I9_9BRAD rbh
Molybdopterin synthase catalytic subunit {ECO:0000313|EMBL:CEG09313.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia feli
SCNpilot_solid_2_scaffold_112_86
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88849..89826
DNA (978bp) protein (326aa)
prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.-); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J0_9BRAD rbh
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000313|EMBL:CEG09312.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
SCNpilot_solid_2_scaffold_112_87
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89847..90311
DNA (465bp) protein (155aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J1_9BRAD
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:EFI51201.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
cytidine/deoxycytidylate deaminase family protein
SCNpilot_solid_2_scaffold_112_88
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90474..91823
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J2_9BRAD rbh
Na(+)/drug antiporter {ECO:0000313|EMBL:CEG09310.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch dise
norM; putative multidrug resistance protein NorM; K03327 multidrug resistance protein, MATE family rbh
SCNpilot_solid_2_scaffold_112_89
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91863..92975)
DNA (1113bp) protein (371aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Branched-chain-amino-acid aminotransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK23_AFIFE rbh
SCNpilot_solid_2_scaffold_112_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93263..93766
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPK8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29450.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
MarR family transcriptional regulator
Displaying items 61-90 of 118 in total

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