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SCNpilot_solid_2_scaffold_112_42

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(43719..44504)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 255.0
  • Bit_score: 443
  • Evalue 2.10e-121
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 245.0
  • Bit_score: 389
  • Evalue 8.00e-106
  • rbh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7E5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 255.0
  • Bit_score: 443
  • Evalue 1.50e-121
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGCCCTACAACATCGACGGTTTGATGATGCAGCACGATTTCAAAAGCCCCCGCCTGTTTGTTGATGCGCCGCTCAATGTGGGCAGCCGCATCGCACTCGAACGCGAGCAGGGACATTACCTCGGTAACGTGCTGCGGCTCGGGGCCGGTGACAGCATTCTGGTCTTTAACGGCCATGACGGTGAATGGCGCGCGCATATCGAAGGCCGCAAGCGCCTCGAACACCTCATCCTAACCGAGCAGATCCGGCCACAGGAGACGCCCTGCGATCTACATCTGTTGTTTGCGCCTCTCAAGCATGCCCGGCTCGACTATATGGTGCAGAAGGCGGTCGAGATGGGAGCAAGCCTGCTTGCGCCGACGCTCACGCAATTCACACAAGTGTCCCGCGTCAACACGGCGCGGATGCGTGCCAATGCCATCGAGGCCGCCGAGCAATGTGGCATCCTCAACCTGCCCGAAATCAATGAGCCACAGCCGCTCACGCGCCGCCTGACCGAGCGAGACGGCCAGCGCCTGCTGATTTTCTGCGACGAGGCCGCACCGCTGGCCGATCCACTCAAGGCCCTCAGCGCGAACAAACCCGGTGGCCTCGATGTCCTGATCGGGCCGGAAGGTGGATTTTCGGAGGAGGAGCGCACCCTGCTGCTGCGCCAACCCCGCCTCATGCGCCTCTCCCTCGGCCCGCGCATTCTGCGGGCCGATACCGCCGCCGTGGTCGCGCTGGCGTTGGTTCAGGCCGCGCTCGGCGATTGGGGCGACCCAAATAGACCGGATTCCCGTTAA
PROTEIN sequence
Length: 262
MPYNIDGLMMQHDFKSPRLFVDAPLNVGSRIALEREQGHYLGNVLRLGAGDSILVFNGHDGEWRAHIEGRKRLEHLILTEQIRPQETPCDLHLLFAPLKHARLDYMVQKAVEMGASLLAPTLTQFTQVSRVNTARMRANAIEAAEQCGILNLPEINEPQPLTRRLTERDGQRLLIFCDEAAPLADPLKALSANKPGGLDVLIGPEGGFSEEERTLLLRQPRLMRLSLGPRILRADTAAVVALALVQAALGDWGDPNRPDSR*