ggKbase home page

SCNpilot_solid_2_scaffold_137_17

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 18982..19263

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 6.40e-43
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 2.00e-43
Conjugal transfer protein TrbD {ECO:0000313|EMBL:GAJ29787.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 9.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCGACCGCCTTTGAACAACTCGACGCGGTGCCGGGTTATACGATCCCGGTGCATCGCGCGCTGACCGAACACATCCTGCTCGGCGGCGCACCGCGCTCCATCGCGATTCTGAACGGCACGCTGGCCGGGGCCGTGGGCCTCGGCCTGCGGCTCTGGCTGGTCGGGCTCCTGATATGGGCGATCGGGCATTTCACAGCCGTTTGGGCAGCGAAGCGCGATCCGCTCTTTGTCGAAGTCGGGCGCAGGCATTTGCGCATCCCGGCTTTCCTGGCGGTCTGA
PROTEIN sequence
Length: 94
MATAFEQLDAVPGYTIPVHRALTEHILLGGAPRSIAILNGTLAGAVGLGLRLWLVGLLIWAIGHFTAVWAAKRDPLFVEVGRRHLRIPAFLAV*