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SCNpilot_solid_2_scaffold_137_146

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(164953..165927)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3U7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 324.0
  • Bit_score: 591
  • Evalue 5.50e-166
  • rbh
Flp pilus assembly protein TadB {ECO:0000313|EMBL:CEG06784.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 324.0
  • Bit_score: 591
  • Evalue 7.70e-166
type II secretion system protein; K12510 tight adherence protein B similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 325.0
  • Bit_score: 529
  • Evalue 1.00e-147
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAGATTCAGACCCTTGCGATTGCATTCATGAGCGCGGTAACGCTGGGCGGCCTTGCCTGGGTGTTCTTGTATCCTTTCCTCTCGGGCGAACGGCAAGCCGAAAAACGCCGCGCTTCCTTCGCCCGCACTGAACCCACGACACAGCGTATCGATCGCAATCAGCGCTCGCGCCGTGAACTGGTCGAAGATACGCTGAAGGATGTCGAAAGCCGTGCCAGGCAGGCCAAGAAAGTTCCGCTGAACACCCGGCTGGCCCAAGCCGGCGTGAACTGGAGCAGACGGCAATTCATCATCGGCTCAGCCGCTCTTGGAATCCTGGTCTTCTTCATCTGCTTTGTGACCGGCGCGAACATGATTGCGACGATCGCGCTCAGCCTCTCGGCCGGCCTTGGCCTGCCGCGCTGGGTGCTCAGCTATCTGAAGCGCCGCCGCGAGAACAAATTTCTCGATGCTCTTCCCGACGCCGTCGATGTTATCGTCCGCGGCGTCAAGGCGGGCCTTCCGCTGTTCGACTCGCTCAAGGTGGTCGTCAACGATTCGCCAGAACCGCTGCGTTCGGAATTCCGCGCCATCATCGAGACCCAGAGCATCGGCATACCGCTCGGCGAGGCCTGCATGCGCCTTTACGAGCGCATGCCGCTGCCGGAGGCCAACTTCTTCGGCATCGTGATCGGCATCCAGACAAAATCCGGCGGCAACCTGTCCGAGGCACTAGGCAACCTGTCCAAGGTGTTGCGCGACCGCAAGAGAATGAAAGCCAAGATCCAGGCGATGTCGATGGAAGCAAAAGCCTCTGCCGGCATTATCGGCTCGCTGCCGCCTGTCGTCATGATGATCGTCTACATCATGTCGCCGGATTACATTTCGCTGCTGTGGACCCATCCGACAGGCCGCTTCATGCTCGCATGTTGCGCCGTATGGATGACCGCTGGCATTCTTGTAATGAAGAAAATGATCAACTTCGATTTCTGA
PROTEIN sequence
Length: 325
MKIQTLAIAFMSAVTLGGLAWVFLYPFLSGERQAEKRRASFARTEPTTQRIDRNQRSRRELVEDTLKDVESRARQAKKVPLNTRLAQAGVNWSRRQFIIGSAALGILVFFICFVTGANMIATIALSLSAGLGLPRWVLSYLKRRRENKFLDALPDAVDVIVRGVKAGLPLFDSLKVVVNDSPEPLRSEFRAIIETQSIGIPLGEACMRLYERMPLPEANFFGIVIGIQTKSGGNLSEALGNLSKVLRDRKRMKAKIQAMSMEAKASAGIIGSLPPVVMMIVYIMSPDYISLLWTHPTGRFMLACCAVWMTAGILVMKKMINFDF*