ggKbase home page

SCNpilot_solid_2_scaffold_133_72

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(75876..77216)

Top 3 Functional Annotations

Value Algorithm Source
SUN protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 446.0
  • Bit_score: 782
  • Evalue 5.50e-224
  • rbh
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS09_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 446.0
  • Bit_score: 837
  • Evalue 7.90e-240
  • rbh
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:EKS30245.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 446.0
  • Bit_score: 837
  • Evalue 1.10e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGAAGCCTTCGCGATTCGTTCCGCCGACCGAGGTGCCTGGCCTCGCCGCGCGCCGCATAGCCGCCGATATCATTGATGGCGTTCTCCACAAACAGCGCACGCTGGACGATCAGCTTGAAGGCCCTGCCGCGCATCCCGCTCTCAAGACTCTGTCTGATCGCGATCGCGCGCTGATGCGCCGGCTTGTCGCAACCGTACTGCGCCGCCTCGGCACGCTCGGCCATCTGTTGTCGCGTCTGCTCGATCGCGGCATTCCGACCGATGCACCGCGCGCGCAGAGCGCGCTTCTGATCGGCGCCGCACAGATTCTGTGGATGGACGTGCCTGATCACGCCGCCGTCGATCTGTCGGTGCGACTCGTGCAGGCCGATCGCCGCGCGGCGAAATATGCCGGCCTCGTCAACGCCGTCTTGCGCCGTTGCGCGCGCGAGGGGTTGCCGCTGGTGGAAGAAGTCAAGGACAAGATGATCGATCTGCCGCCGTGGCTGGTAGCGCGCTGGATCAAGGCCTATGGCGAAGACAATGCACGCGCGATGGCCCGCGCCATCGGCCATGAGCCGCCGCTCGATCTCACGGTAAAATCCGAATCCGCAAGCTGGGCCACGCGGCTCCATGGCGAAACACTGCCCACCGGCACCGTGCGCACGCTTCTGCATGGACCTATCACGATGCTACCCGGCTTTTCCGAGGGCGCATGGTGGGTGCAGGACGCCGCCGCCGCGATTCCGGCGCGACTGTTCGGCGATATCGCCGGCAAATCCGTCGCCGATCTGTGCGCAGCTCCCGGCGGCAAGACCGCGCAGCTCGCTCAGGCGGGGGCGCGCGTCACCGCCGTCGACCGCTCCAGCGGGCGGCTTGCGCGCTTGAAAGACAATTTTGCGCGGCTCTCGCTCGAAGCGACTTGCGTGGCGACCGACGCGACGGAATGGGACGCCGAGCCGTTTGACGCCATCCTCCTCGACGCGCCCTGCACGGCGACCGGCACCATTCGCCGCCATCCCGACGTCGCCTGGCTGAAGAACGAAGCCGATCTGGGTACGCTCAACATCCTGCAAAAACGCCTGCTGCAGAAAAGCGTGATGCTGCTGAAACCCGGCGGCACGCTGGTCTACTGCACATGTTCGCTGGAACCGGAGGAAGGCGAACAGGCCATCACCGCGCTTCTGGACTCGGAACCTGGGATGAGGCGCCAGCCGATCGAACCCGGCGAACTGGCCGGACTGTCGGAACTCATCACCGCAGATGGCGACGTCCGCACGCTGCCCTGCCATTTGCCCCATGTCGATCCGAAACTGTCGGGGCTCGACGGCTTTTACGCCGCGCGCCTGGTCAAGGCTTGA
PROTEIN sequence
Length: 447
MKPSRFVPPTEVPGLAARRIAADIIDGVLHKQRTLDDQLEGPAAHPALKTLSDRDRALMRRLVATVLRRLGTLGHLLSRLLDRGIPTDAPRAQSALLIGAAQILWMDVPDHAAVDLSVRLVQADRRAAKYAGLVNAVLRRCAREGLPLVEEVKDKMIDLPPWLVARWIKAYGEDNARAMARAIGHEPPLDLTVKSESASWATRLHGETLPTGTVRTLLHGPITMLPGFSEGAWWVQDAAAAIPARLFGDIAGKSVADLCAAPGGKTAQLAQAGARVTAVDRSSGRLARLKDNFARLSLEATCVATDATEWDAEPFDAILLDAPCTATGTIRRHPDVAWLKNEADLGTLNILQKRLLQKSVMLLKPGGTLVYCTCSLEPEEGEQAITALLDSEPGMRRQPIEPGELAGLSELITADGDVRTLPCHLPHVDPKLSGLDGFYAARLVKA*