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SCNpilot_solid_2_scaffold_133_140

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(141041..141589)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSC2_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 172.0
  • Bit_score: 314
  • Evalue 7.30e-83
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 172.0
  • Bit_score: 314
  • Evalue 1.00e-82
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 172.0
  • Bit_score: 306
  • Evalue 6.20e-81
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGGCGAACTTCGAATGCGGACACTGGCAAGGCAGCGCGCATCTGCGTTGCAAAAATCGGCGCCGCGCACGGGGTGCGCGGCGAGGTGCGGTTGTGGCCGTTCACCGAAGACCCGATGGCGGTGATCGATTACGGCCCGCTTTCGACCAGGGACGGCGCGCGGCAGTTTGAAGTGGCGCACGCCCGCGCCGCCAAGGATCATCTGGTGGCAATGCTCAAGGGTGTCACCAATCGCGACGAGGCCGAACGCCTCAACGGCATCGAGCTCTATATCGCGCGCGACGCGCTGCCCGACACCGATGAGGGCGAGTACTACCATGCCGACCTGATCGGGCTCGCCGCCATCAATCCGCAAGGTGCGTCTATCGGCACCGTCACCGCGATCCATAATTTTGGCGCGGGCGACATCATCGAAATTGCGCCGAAAAGCGGTCCGTCACTTTTGCTGCCCTTCACCAACGCCGTGGTGCCGACCGTTGATCTCGCGGCGGGGCACGTCGTGATCGAATTGCCGGGCGAGATCGACGGCGAGGACAACCCGCCGTGA
PROTEIN sequence
Length: 183
MRRTSNADTGKAARICVAKIGAAHGVRGEVRLWPFTEDPMAVIDYGPLSTRDGARQFEVAHARAAKDHLVAMLKGVTNRDEAERLNGIELYIARDALPDTDEGEYYHADLIGLAAINPQGASIGTVTAIHNFGAGDIIEIAPKSGPSLLLPFTNAVVPTVDLAAGHVVIELPGEIDGEDNPP*