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SCNpilot_solid_2_scaffold_83_154

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(162082..164481)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V332_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 798.0
  • Bit_score: 1382
  • Evalue 0.0
  • rbh
Bacteriophytochrome cph2 {ECO:0000313|EMBL:CEG07153.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 798.0
  • Bit_score: 1382
  • Evalue 0.0
PAS/PAC and MHYT sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 799.0
  • Bit_score: 909
  • Evalue 9.20e-262
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2400
ATGCTCAAGATCTATAATTGTATCGCGACCGCTCATGATCTGCGGCTGGTCGTTCTCGCGGCGATCGTTTGCGCGCTGTCGTCCTTCGCCGCCTTCCGCCTGCTGCATCATGCACGCACCGTGCACGGCCAGATGCGGCTCATCTGGCTCGCGGTGTCCGCAGTGTCCATCGGCTTTGGCATCTGGTCGACGCATTTCATCGCGATGCTGGCGTTTTCACCCGGCATCCCGAGCGGATACAACATCGCCCTGACCGCGGCCTCGCTGGTGGCGGCCATCCTGCTGACCGGCGGTGGCCTGGTGGTGGCGATGATCCCGGGCTGGGGCGCGGGCCCTGCCCTGGGCGGCGCCATCGTCGCGGGCGGCATCGCCGCGATGCATTACACCGGCATGGCCGCCTTCGAGATTGCGGGCATCGTGGTCTGGGATTTCGCGATGGTCACATGGTCGATCGTGCTTGGCGCAGTCCTCGGCGCGATCGCGCTGCCGGTCGGCCTGCATGATCCCTCCGGAAGATGGAAGGCGGCTGGCGCAGCGCTGCTGACGCTGGCGATCTGCAGCCATCATTTCACCGGCATGGCCGCTGTCACCATTCTTCCCGATCCGGCGCTGCATGTACCCGACGCCGCGCTGCCGCCGGCCCTGCTCGCCATTCTCGTCTGCGCCGCAAGTCTGACAATCATTCTGCTTTCGCTTGGCGCAGTGGCGCTCGACGTCCGTGACAGACGACGCGCCGAGCTTGAGACCGACCGGATGCGCGGCCTTGTCAACGCCGCCGTGGAGGGCCTCGTGATCTGCGACGACGACACCATCGTCACTGTGAATGAAAGCTTCACGCAACTGGTCGGGCTGTCATCGACCATGCTGATCGGCAGCAAACTCGACCTCTGCCTCCCCGACGACACCGCACGCGAACAATTGCTGACCTCCCTGAACCAGCCGATGGAAGTGACATTGCGCCATCACGACGGGTCGATGATTCCGGCGGAAGTGATCTGGCGGCCGATCGATTATGCGGGCCGCCGACATCACGTCATTGCGGCCCGTGACCTGCGCGCGCGCAAGAAGACCGAGCAGCATATCCGCTATCTCGCCCATCACGACGCGCTGACCTCGCTGCCCAATCGCGCCTATTTCAACGCCACGATCGAACAAGCGCTCAAGGCGAGGCCGGACGCCGGCAAGCTCGCCGTGCTCTGTCTCGATCTCGACCGCTTCAAGGAGGTTAACGACCTGTTCGGCCACGCTGCGGGTGACAGGGTGCTGCAGACGGTCGCCAATCGCATCAGCGGCCTGCTCAGGAACGGGCAGATCATGTCGCGCCTCGGCGGCGACGAGTTCGCCATCCTGTTGCCGCATATCATCAGTGCCGACGCCGCGCGCCGCCTGGCCGAAAATGTGCTCGCCGCATTGCGCGTCAAGGGTGATACGCCGGAGACCGACAGCATCTCGTGCAGCATCGGAATTGCGATCTGCCCGGACGATGCAGATGACCGTCAGGCGCTGCTCAACCACGCCGATACCGCGCTGTACCGCGCCAAGACCGAGGGCCGGAACACTTTCCGCCTCTTCGAGGCGAAGATGGGCGCCGAGGTCCGCGAACGGCGGATGATCGAGCACGATCTGCGCCAGGCGGTGGCCGGCAACGAATTCCGGCTGGTCTACCAGCCCCAGCACGACATCCAGGCCGACATTGTGACGGGTTTCGAGGCGTTGTTGCGCTGGAAACATCCGGGGCGCGGCGATGTCTCGCCTGCGACGTTCATTCCGATCGCGGAGGAAGCCGGAGCCATCCTCGGCATCGGCGAATGGGTGTTGCGCACGGCCTGCCGCGAGGCCGCGTCATGGCCTCAGCCCTTGACCGTCGCGGTCAACGTCTCGACCCTGCAGATTTACGATCCGCACCTCGCGAAGCTCGTGCACGGCATCCTGCTGGAAACCGGGCTTGCTCCGGACCGGCTCGAACTCGAGATCACCGAGACCGCGCTGGTGCGTGACCTCAACCGCGCCCTGCTGACGCTGCGCCAGATCAAGGCGCTCGGCGTTCGCATCGCGATGGACGATTTCGGCACCGGCTATTCGTCGCTGTCGAATCTGCGCGCCTTCCCGTTCGACAAGATCAAGATCGACGGCTCCTTCATCAAGTCGGTCGACAGCAACGAACAGGCGGCGACCATCGTGCGCACCGTGCTCGGGCTCGGACGCGGACTCGGCCTGCCGGTGCTGGCCGAAGGCGTCGAGACCGCGGGCGAGATGAAATTCCTGCGCGAGCAGAACTGCGACGGGATTCAGGGCTATCTGATCGGCCGCCCGGCGGCGATCGAGAATTTCCGGCACTACACCCACAACGAGGCACCGGCCGACACCAGGACAGCCGTCGCGGTGGCGAAAGCAGGATAG
PROTEIN sequence
Length: 800
MLKIYNCIATAHDLRLVVLAAIVCALSSFAAFRLLHHARTVHGQMRLIWLAVSAVSIGFGIWSTHFIAMLAFSPGIPSGYNIALTAASLVAAILLTGGGLVVAMIPGWGAGPALGGAIVAGGIAAMHYTGMAAFEIAGIVVWDFAMVTWSIVLGAVLGAIALPVGLHDPSGRWKAAGAALLTLAICSHHFTGMAAVTILPDPALHVPDAALPPALLAILVCAASLTIILLSLGAVALDVRDRRRAELETDRMRGLVNAAVEGLVICDDDTIVTVNESFTQLVGLSSTMLIGSKLDLCLPDDTAREQLLTSLNQPMEVTLRHHDGSMIPAEVIWRPIDYAGRRHHVIAARDLRARKKTEQHIRYLAHHDALTSLPNRAYFNATIEQALKARPDAGKLAVLCLDLDRFKEVNDLFGHAAGDRVLQTVANRISGLLRNGQIMSRLGGDEFAILLPHIISADAARRLAENVLAALRVKGDTPETDSISCSIGIAICPDDADDRQALLNHADTALYRAKTEGRNTFRLFEAKMGAEVRERRMIEHDLRQAVAGNEFRLVYQPQHDIQADIVTGFEALLRWKHPGRGDVSPATFIPIAEEAGAILGIGEWVLRTACREAASWPQPLTVAVNVSTLQIYDPHLAKLVHGILLETGLAPDRLELEITETALVRDLNRALLTLRQIKALGVRIAMDDFGTGYSSLSNLRAFPFDKIKIDGSFIKSVDSNEQAATIVRTVLGLGRGLGLPVLAEGVETAGEMKFLREQNCDGIQGYLIGRPAAIENFRHYTHNEAPADTRTAVAVAKAG*