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SCNpilot_solid_2_scaffold_285_50

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(57621..59162)

Top 3 Functional Annotations

Value Algorithm Source
lcfB3; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3) similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 513.0
  • Bit_score: 904
  • Evalue 1.10e-260
  • rbh
AMP-dependent synthetase and ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 513.0
  • Bit_score: 959
  • Evalue 1.20e-276
  • rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEG09043.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 513.0
  • Bit_score: 962
  • Evalue 2.00e-277

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGCTGATCCATCAACTTTTGCAGGATGCTAGGGATTCAAGGCCTGCGATCATTTTCGAGGGCCAGACGCTTTCCTATGCGGAGCTGGACGATCTTGCGAACCAGTTCGCTCATCTGTTCGGCGAATTGAGGCTCGACGTGGGCGATCGCGTCAGCCTGTTGATCGGCAACGAACCGCTGGTGGTGGCGGCCTATTTCGGTTTGTTCAAGACAGGCTTGATCGCCAACCCGATCAACAACCGTCTCACCGCGCACGAGGTCACTTTTGTTCTCGAACATTCGCAGGCGCGCGTTCTCATCACGACGCCTGAGTATCTGGCTTTGGCGCAGGAGGCCATCGCGGGCCTGACGCATCAACCTCGCATTGTGTTGCTGGGCGCGGCTGAGGGCGCTGTCTTGCCGGTTGATGTGTTTTCCGAACTCGATTTGTATCGGCAAAAGCGCACGCCACGTGCTGTCGATGGGATCATGGAGCAGCTTCCGATCCTGCTGATCTATACGTCGGGCACCACCGGCCGGCCGAAAGGCGTTCTGCTCAGTCATGCCAACGTCTGGGCCGATGGCATCGCGCTCTCGCAAGGGTTCCGCATGGGGCCGGATCACGTCGCCCTGTGCTTCATGCCGCTGTTCCATTGCAATGCGCTGATCGTCAGTCACATTAGCGCCTTCATCGGCCACGGCACCATCGTGCTGTGCCGCAAGTTCAGCGCGCGCGAGCACTGGCGGCTCGTAGCGGATCACAACGTCAACAGCTTCAGCGCACCGCCGACTGTGCTCGCCATTCTTCTGGAGCGTGAGGCGGAAGCGCGTCATGCCGCGATCAAGCTCGATTTCGTCAAGACGGGTTCAGCACCGTTGACGGTCGAACTCGCGACACGCTTCGAGAACAGGTTCGGCAAGGATATCCTGATCGAAGGATGGGGCCTGACGGAATGCACGGCGACGAGCACGCTCAATCCGCTTTTTGCTGGCGGTCGACGCAAGATTGGTTCGGTCGGGCAGGCTCTGGCCGGACAGGAGATCGCCGTCGTCGATGAGCGGGGCAACTTCCTGCCGCCTGAGAGCACGGGGGAACTGGTGATCCGATCGCCGACGATGATGCTCGGCTACTTCCGGGACGAGGAGGCGACACGAAGGACTATCGTGAATGGCTGGCTTCATACCGGCGATCTCGGCCGGATGGATCGGGAAGGCTACGTCTTCCTTGTTGGCCGCAAGAAGGAAATCATCATCCGTGGCGGTGAGAACGTCTCGCCGCTCGAGATCGAGGAAGTGCTCTGTCGTCATCCGTCAGTGCGGGATGTTGCGGTTGGTGGGCTTCCCGACAGGATCTGGGGTGAGGTCGTCGTCGCCTGTGTGGTCTCGAATGGATCGGCATCCGAGCAGGAGCTGGTCGCTTACTGTCGCGAGAATCTCGCGGATTTCAAGGTTCCGGCTAAGATCGCCATCGTCGATGAACTCCCGCGCAATGCCACCGGAAAAATCCTCCGGCGCAATCTTGCGCAATTCTTTCAGCCTGAAGCGAAGGAGATGGCATCATGA
PROTEIN sequence
Length: 514
MLIHQLLQDARDSRPAIIFEGQTLSYAELDDLANQFAHLFGELRLDVGDRVSLLIGNEPLVVAAYFGLFKTGLIANPINNRLTAHEVTFVLEHSQARVLITTPEYLALAQEAIAGLTHQPRIVLLGAAEGAVLPVDVFSELDLYRQKRTPRAVDGIMEQLPILLIYTSGTTGRPKGVLLSHANVWADGIALSQGFRMGPDHVALCFMPLFHCNALIVSHISAFIGHGTIVLCRKFSAREHWRLVADHNVNSFSAPPTVLAILLEREAEARHAAIKLDFVKTGSAPLTVELATRFENRFGKDILIEGWGLTECTATSTLNPLFAGGRRKIGSVGQALAGQEIAVVDERGNFLPPESTGELVIRSPTMMLGYFRDEEATRRTIVNGWLHTGDLGRMDREGYVFLVGRKKEIIIRGGENVSPLEIEEVLCRHPSVRDVAVGGLPDRIWGEVVVACVVSNGSASEQELVAYCRENLADFKVPAKIAIVDELPRNATGKILRRNLAQFFQPEAKEMAS*