ggKbase home page

SCNpilot_solid_2_scaffold_322_27

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 30594..31418

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 274.0
  • Bit_score: 525
  • Evalue 3.10e-146
  • rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EFI51598.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 274.0
  • Bit_score: 525
  • Evalue 4.40e-146
iclR; acetate operon repressor; K13641 IclR family transcriptional regulator, acetate operon repressor similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 274.0
  • Bit_score: 492
  • Evalue 7.00e-137
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAGCACGGCAGACCACCGCAAGCGAGGACGGCCGCGTAGCTTCAATCCCGCAAAGGCCGGTTCGATCCAGGCGCTGGACCGTGGACTTGCGTTGCTGCGGCTGATCTCGGAGGCTGACGGGCTGACGCTGACCGACCTGGCGCAGCGCTCCGGCCTCGCCCCTTCCACCGTACACCGGCTGTTGTTCACGCTCGAGGCGCATCGCTTTGCGGTGCATGACGAGGAGCGAGGGCTGTGGCTGATCGGCGTCGACGCCTTCAAGACCGGCACCGCGTTCCTGCGCAACCGCCGCCTCGCCGGGATGGGCCGCGAGGTGATGCGCCAGTTGATGGAGCAAACCGGCGAGACCATCAACCTCGGCATTGAGGACAATGGTGAGGTGGTGTTCATCTCGCAGATCGAAAGCCACAACACGCTGCGCGCCTTCTTCCGCGCCGGCACGCGCAGCCTGATGCACGCCTCCGGCGTCGGCAAGGCGCTGCTCGCGGGTTTCCCCGAAGCACGCGTGAAGCAGATCCTCTACTCAAAAGGCCTGCAGCGATTCACCGAGAAAACCCGCGTCGATCCGGCGGAGTTGTTCACTGAGTTGGCGGAGAGCCGCGAGCGCGGCTGGGCGATCGACGACGAGGAACGCGCGCCCGGCATGCGCTGCATTGCGGCCCCGATCTATAACGAACTGGGGGAAACCATCGCTGCGGTGTCGATTTCCGGCCCGACAGTGCGGCTGACATCGCAACGGCTCGGAGAATTCGGTCCGCTGGTGATGCGCGCGGCCGAGCAGATAACGTCCTCGATCGGCGGGGCGGCACCACACCGCGCTTGA
PROTEIN sequence
Length: 275
MSTADHRKRGRPRSFNPAKAGSIQALDRGLALLRLISEADGLTLTDLAQRSGLAPSTVHRLLFTLEAHRFAVHDEERGLWLIGVDAFKTGTAFLRNRRLAGMGREVMRQLMEQTGETINLGIEDNGEVVFISQIESHNTLRAFFRAGTRSLMHASGVGKALLAGFPEARVKQILYSKGLQRFTEKTRVDPAELFTELAESRERGWAIDDEERAPGMRCIAAPIYNELGETIAAVSISGPTVRLTSQRLGEFGPLVMRAAEQITSSIGGAAPHRA*