ggKbase home page

SCNpilot_solid_2_scaffold_502_43

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 45674..46231

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 185.0
  • Bit_score: 362
  • Evalue 2.40e-97
  • rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.; similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 185.0
  • Bit_score: 362
  • Evalue 3.30e-97
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 185.0
  • Bit_score: 349
  • Evalue 5.00e-94
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCTGAGAATGCTTATATTCCGCGGCTGCGCACGGTGTATGACCGCGACATCCGCAGCAAGCTGACCGAGCAGTTCGGCCTCGCCAACGCAATGCAGGTGCCGCGCCTGGAGAAGGTCGTGCTCAATATGGGTATCGGCGAAGCTGTGAATGACCGCAAGAAGGTCGAGCTGGCGGCGAACGATCTCGGATTAATCGCCGGCCAGAAGCCGATCGTGACCCATTCGCGCAAGGCCATCGCGACCTTCAAGCTGCGCGAAGGTCAGGCCATCGGCGCCAAGGTCACGCTGCGCAAGGCGAAGATGTACGAGTTCATCGACCGCCTCATCAACGTGGCTCTGCCGCGCGTGCGCGACTTCCGCGGCCTCAACCCCAAGAGCTTCGACGGTCGCGGCAATTATTCGCTCGGTTTGAAAGAGCACATCGTGTTCCCGGAAATCGACTATGACAAGTCGGGCGAGACCTGGGGCATGGACATCACGGTTTGCACCACCGCCGCCAACGACGAGCAGGCGAGGGCATTGTTGACCGCATTCAATTTCCCGTTCCGGCAGTGA
PROTEIN sequence
Length: 186
MAENAYIPRLRTVYDRDIRSKLTEQFGLANAMQVPRLEKVVLNMGIGEAVNDRKKVELAANDLGLIAGQKPIVTHSRKAIATFKLREGQAIGAKVTLRKAKMYEFIDRLINVALPRVRDFRGLNPKSFDGRGNYSLGLKEHIVFPEIDYDKSGETWGMDITVCTTAANDEQARALLTAFNFPFRQ*