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SCNpilot_solid_2_scaffold_1585_6

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5330..6364)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic subtsrate-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 344.0
  • Bit_score: 663
  • Evalue 1.20e-187
  • rbh
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:CEG09055.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 344.0
  • Bit_score: 663
  • Evalue 1.70e-187
periplasmic subtsrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 333.0
  • Bit_score: 359
  • Evalue 1.20e-96

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAAAACGTCTCTTTGGTTGAAAGGTATCGTTGCCAAGACTGCTTTGCTTGCTTCCGTCGCTCTCGCCAGCGTTACGATCAATCAGACATCAGTGCGCGCCGAGGTGAGCCAAGTAACCATCGCGAAGCAGTATGGACTGTTGTTTCTGCCTTTGATTATCATGGAGCAGAACCATCTGATGGAGAAGCATGCGGCGAAGGCCGGCATTCCCAATCTCGTTGTCAAATGGCAGCGCATGACGGGTGGCAACGTCATGAACGAGGCGTTGATCTCTGGCAATCTCGATTTTGCCTCAGGCGGCGTGCCGCCGTTCCTGATCCTGTGGAGCAAGACGCAGGGCAATCTGGACGTCAAGGGCGTTGCAGCGATGGACTCGCTGCCGATCTACTTGAACACGCGCGATCCTTCCGTGAAGACGATCAAGGACATCACCGACAAGAACCGTATCGCGATGCCGGCGGCCGGTATTTCTATTCAGGCGATCATGCTGCAGATGGCGGCTACGAAGGAATGGGGACCGGATCAGGCACGTCGTCTCGACAAGAACGGCGTGACGCTGGCGCATCCCGAAGCGATGTCGCAAATGCTGTCCAACATGGGTGCTATCGACAGCCATTTTGCTTCGCCGCCCTATAATTTCCAGGAATTGACGAAGCCTGGCATCCATAAGGTGCTTGATTCATACGATGTGCTTGGCCCCGCGACCTGCGAGGTGGTTTGGACCACCAGCAAGTTCCACAAAGAAAACCCGAAGGTCTACAAGGCGTTTCTCGATGCTTTCCAGGAGTCGATCGACTTCATTAATGCCAACAAGCAGCAAGCCGCAGAGATTTATGTCAAAAGCACCGACAACAAGGAATCTTTGAGGGATACGTTGGAGATCATCAATCATCCGCATACCGAATACACCACGACGCCGAAGAACATCATGAAATATGCGACATTCATGAAGCAGGTTGGCCTCGTCAACAAGACGCCTGCTGACTGGAAGGACCTTTTCTTCCCGCAGGTTCATGCATTGCCGGGCAGCTAA
PROTEIN sequence
Length: 345
MKTSLWLKGIVAKTALLASVALASVTINQTSVRAEVSQVTIAKQYGLLFLPLIIMEQNHLMEKHAAKAGIPNLVVKWQRMTGGNVMNEALISGNLDFASGGVPPFLILWSKTQGNLDVKGVAAMDSLPIYLNTRDPSVKTIKDITDKNRIAMPAAGISIQAIMLQMAATKEWGPDQARRLDKNGVTLAHPEAMSQMLSNMGAIDSHFASPPYNFQELTKPGIHKVLDSYDVLGPATCEVVWTTSKFHKENPKVYKAFLDAFQESIDFINANKQQAAEIYVKSTDNKESLRDTLEIINHPHTEYTTTPKNIMKYATFMKQVGLVNKTPADWKDLFFPQVHALPGS*