ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_825_5

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(4362..5882)

Top 3 Functional Annotations

Value Algorithm Source
Probable outer membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFG8_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 505.0
  • Bit_score: 202
  • Evalue 1.10e-48
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:AKF10459.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 466.0
  • Bit_score: 304
  • Evalue 2.20e-79
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 505.0
  • Bit_score: 202
  • Evalue 3.50e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGAGTAGGACCATTTCTCGCGTGCGCTCGGTTCGGTACGCGCTCGCGTTTGGCAGTCTCTTGTCGTTCCTGGCTTCGGCCGCGGGCGCCCAGGATGAAGGGCAGGTACGAAGGCTCGACGACAGCCGTGCGGTTCGAACGGCGATGGCGAGCAACCCTACGCTTCGGGCTGCGGTGCTCGACCTACAGCGGGCCAACGAGAGTGTGCGCTTCGAAGACGGACGCTATCCCTACACGTTGCAGCTGGACGCGGGCGTGACACGCTCGGCCATGCCGCGGGTGTCGGGTGACGGGGTGGAGGTGTCCAAGAGCGATTCGGTGGACGTAGGGGCCGAGCTGTCGCGGACGTTTGCGACCGGGACGAGGGCATCGTTGCGGGTGGAGGGGTACCGGGACATCGGCAGGGAGCCGGTGAAGAGCGGGCCCGGCTACGGCACGAGCGCTCGGGCGAGCGTGACGCAGCCCTTGATGCGGGGCGCCGGTGTCGAGGTGGGCGAGCAGCAGCTACGGGTGGCTCGCATCAACCGCACCGCCGCGGAGCTCTCGCGGGATCGAGTGGCGAGCGAGGTGGCTCGCGAGGTACTGCTGGCGTACTGGGAGCTGTGGTACGCGGAGGCGGCGGTCGGCATCGAGGGCAACGCGCGGGACCTCGCGAAGCGGCAGCGCGACGAGGCGCAGCAGCGGGTGGACGACGGGGCGCTTGCGCCTGTGGAGGTGCTTCCGTTCGAGACGCGGGTGGCGAGCCTGGAGGAGAGTGTGGTCAGCGCCCAGACGGATCAGCGGCGGCGGAGTCTTGCGCTGGCGCAGAGGATGGGGACCACGGAGGGGCTGGGGACGGGCTTGGCGGCGGAGATTCGGCAGCAGCCGGCAGCTACTCCGATGCCGTTGCGCACGGCCGCGGTGGAGCAGGCGCTCGCGAACTCGCCCGAGATCAAGGAGCTCGAGGCGCAGCTGCGCTTGACTCAGGAGCAGATCCGCACCTCCGGGGACGCCTATCGTCCGCGGCTCGATCTCGAGGGGTACGTGCAGGTGGCGGGCCTCGGAAATCAAGAGATCCCGCCCGCGTTCGAGCAGATGGCGACGGCCCGCGCGACGAGCGTGCACGTGGGCGTGGTGTACGAGCTTCCGCTCGACGATGCGCGAAAATCCTCGGAGCGAGCGCGGGACCTGCTCGCGATGCAAGTGGCGGAGCAGCGCTTGCTGGCGGCTCGCCAGCGCATCCAGACGGAGGTCGAGACCCTTCTCGAGCAGGAGAGGGCGGCACGCATCCGGCTTCAGATGGCGGAGAAGACCGCGGAGATCGCGGCCAAGCAGGTGGCTGCCGCCACCGAGCGGTTCGAGATCGGCGTGGCGATTCCCGTGGAGGTGCAGCTGGCGGAGGACGAGCTTCGCAAGGCGCGGCTGCGAGCGGTTCGCGCACGGATCGACCTGGTCGAGGCGGAAGTCCAGCGGGACCACGCCACCGGCCGGCTCCTGACCCGGGTCGCCGATCAGATGGGCCCCGCCACCGCCTCCCGCTAG
PROTEIN sequence
Length: 507
MSRTISRVRSVRYALAFGSLLSFLASAAGAQDEGQVRRLDDSRAVRTAMASNPTLRAAVLDLQRANESVRFEDGRYPYTLQLDAGVTRSAMPRVSGDGVEVSKSDSVDVGAELSRTFATGTRASLRVEGYRDIGREPVKSGPGYGTSARASVTQPLMRGAGVEVGEQQLRVARINRTAAELSRDRVASEVAREVLLAYWELWYAEAAVGIEGNARDLAKRQRDEAQQRVDDGALAPVEVLPFETRVASLEESVVSAQTDQRRRSLALAQRMGTTEGLGTGLAAEIRQQPAATPMPLRTAAVEQALANSPEIKELEAQLRLTQEQIRTSGDAYRPRLDLEGYVQVAGLGNQEIPPAFEQMATARATSVHVGVVYELPLDDARKSSERARDLLAMQVAEQRLLAARQRIQTEVETLLEQERAARIRLQMAEKTAEIAAKQVAAATERFEIGVAIPVEVQLAEDELRKARLRAVRARIDLVEAEVQRDHATGRLLTRVADQMGPATASR*