ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1268_2

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 414..2105

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: lysine-rich arabinogalactan protein 19-like n=1 Tax=Setaria italica RepID=UPI00035111E2 similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 148.0
  • Bit_score: 72
  • Evalue 1.10e-09
lysine-rich arabinogalactan protein 19-like similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 148.0
  • Bit_score: 72
  • Evalue 3.60e-10
Nuclear pore complex interacting protein {ECO:0000313|EMBL:BAK62200.1}; TaxID=9598 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan.;" source="Pan troglodytes (Chimpanzee).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 105.0
  • Bit_score: 68
  • Evalue 3.90e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pan troglodytes → Pan → Primates → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 1692
ATGCGCAGGCTAGCTCTCCTTTCCGTCGTTGCCATTGGCCTTTCCGCTTCGGGTCTTGTTCGAGCGCAGCCCGAGGAGAGCCCTGCGGACCCGCCGGGCAACCCCGATGGGTCGGCCGGGAATCCCCCGACCGAGGCGACGGAGCCCACGGAGCCCGAGGCGCCCCCGGAGCCGCCGCCTTCCGTGGACGAGGCACCTCCGGAGAAGACTCCTCCCGTCGCGCCGCCGCCCCCGCCGCGCCCTGCTCCCTCGGCTGAGCCGCCACCTGCTCCGAAGGACACCCGGCCTCGCACGCTGGCCCCGACCTTCGCGGAGGACCGGTATCCGGGCGACGGCACGCCGAGCTCCACGGAATTGCAGCTCACGAAGCCCGGAGACGAGGCGCCGTCCTTTGGAATTGCGCTTCATGGCTACTTCCGGGCCCCGTTCCGTTTCTCGCGTGTCGAGCGCGATGCGGAGGACGTCGGGGAGGGAGAGAGCAAGCACAACTACAGGACGCCGTTCTTGCTGGACGACGACTACTACGTCTCAGGCTTTTCCTACTTGCCGGTGAACCAGAAGCCGTGGAACGAGACCTACCTGAGCGTGGGCAACGAGCGGCTCACGGCGACGGTGGGGCTGGCGAGCGCGCAGTTCAGCGACTCGGAGGCGGAGGACTACAGCAGTCAGTTCGGGGTGGCGCAGGGGTGGCTCACGTACCGCTTCCGCCCCGCGGACTGGATGCGTGTGCAGGTCAAGGGAGGTTCCTTCTGGGACCGTTTCGGGTACCTGCCCAAGTACGACACGTACATCTTCGGGCGGACGCACCAGGTGGGGGCGCAGGCCAAGGTTCAAGTGGAGACGGGGCCGCTGACCTTCTGGGTGCTCGACGGCGTGGGTGGTCACACGGAGAGCATCAAGTCCAAGCAAGGGCTCACGATGCTCCACTATGCGAGTGCGGGAGTGAGCTGGGATCGGACGGCAGAGCTTGGCCTGTACTACCTGAACGCACGGTCTCGCGACAAGCGATCGATGCAGGACATCGAGGACGGCGAGATGGGTGTTCTGGGCTTGGACCTGCGGTTGCACACCCCGGTGGCCAAGGTCTATGCGGCCTATTCGTCCATCAACGCCGACAAGGTACTCTACCTGGCGCCGGCCCTGGAGGTCATGCACTCCTACGGGCGTCTTCTGATGGACAACTACCTGGGAACGGAGCAGGGCAGCGAGAAGGGGACGGGCAGCCTGAAGAACTACGCCTTCCAGGTCGACTTCAGTGTGGCGGATTCGTACCGTGGTTTCACCGGCAGTGCGTCGTCGCCCCTGCCCTGGAACGGGGACCTGGTGGCGTCGGCCTTCGGGGTGATGACCAAGGTCGAGAGCTCGCAGGTCTCGGCGGACCCGCTCGAGAACAAGGATGGGGTGACCAAGTGGAAGTGGGGGTTCGACGGCGGGTGGCGGGCCACGGAGTGGGCAGGCGTGTTTCTCCGGTACGACCGGGTCATTCCGGACGTGGACGACAGCGCGTCGTCCTTCCGGGTGATTTCCCCGCGGGTGGCGCTGTTCACGCACTTCCTGTCCCAGGAGCAGATCTACTTTCAGTACTCGAGCTACTCGTACAAGGACCGTGTGCGTCTGCGGCCCGGCCAGGTGGCGAACGAGGAGTTCCCGGACGAGAAAGTGTTCAAGATTCAGGCGGAGATCAGCTACTGA
PROTEIN sequence
Length: 564
MRRLALLSVVAIGLSASGLVRAQPEESPADPPGNPDGSAGNPPTEATEPTEPEAPPEPPPSVDEAPPEKTPPVAPPPPPRPAPSAEPPPAPKDTRPRTLAPTFAEDRYPGDGTPSSTELQLTKPGDEAPSFGIALHGYFRAPFRFSRVERDAEDVGEGESKHNYRTPFLLDDDYYVSGFSYLPVNQKPWNETYLSVGNERLTATVGLASAQFSDSEAEDYSSQFGVAQGWLTYRFRPADWMRVQVKGGSFWDRFGYLPKYDTYIFGRTHQVGAQAKVQVETGPLTFWVLDGVGGHTESIKSKQGLTMLHYASAGVSWDRTAELGLYYLNARSRDKRSMQDIEDGEMGVLGLDLRLHTPVAKVYAAYSSINADKVLYLAPALEVMHSYGRLLMDNYLGTEQGSEKGTGSLKNYAFQVDFSVADSYRGFTGSASSPLPWNGDLVASAFGVMTKVESSQVSADPLENKDGVTKWKWGFDGGWRATEWAGVFLRYDRVIPDVDDSASSFRVISPRVALFTHFLSQEQIYFQYSSYSYKDRVRLRPGQVANEEFPDEKVFKIQAEISY*