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08E140C01_z5_2013_Ig3399_v2_scaffold_1063_27

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_36_8

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: comp(31675..32511)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3581741 bin=GWC2_Bacteroidetes_40_22 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 192.0
  • Bit_score: 200
  • Evalue 2.30e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Bacteroidetes_42_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 192.0
  • Bit_score: 200
  • Evalue 3.30e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 174
  • Evalue 5.60e-41

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Taxonomy

RBG_13_Bacteroidetes_42_15_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 837
TTGGGCAAAAGTATTGAAATTTTACTTCATTTTTGTCATATTTTTTCAGGAGGGTTAGCTATGAATGTATTGAATGTAACAGGTCCAATTCAAAAATTAAAACCGGAATTCAATTTTACCTTAAACCCATTCACCTGTTTATGTTCAATTAAATCTATTTTGAGATATCTAATTAAATTAACTTTACTAAGGCTTGTAAATTTTTTTTCAAAAAAGTGTAACAGTAAAAAAAATGCGATGTCTTTAGATAAAAACAGAACTGAATTGAGCAAAAAAGTCCATAATATTCATGATGAGCTGATCAATGCTTGTTTGGCTGGCGACCAGAAGGCGCAATTCAAAATCTATAATTTGTATTATAAGGCGATGTATAACACTTCATATAGAATATTAAACGATCAAATGGAAGCAGAAGATGTGATGCAAGAGGCTTTTTTAGATGCCTTCCAGAAGATTTACCAATATGATGGAAGTGCAGCATTTGGCGCATGGTTAAAGCGTATCGTAATCAATAAATCGCTTGACCGGTTAAAAAAAATGAAACATGATATTTCGATTGATGAGATAGAAAATGAACTAATTGAAAGGGATGAAGAAGATTATTTTGAAGTGCTTTCAATGAAAATTGAAGCCATCAAAAAAGGAATAGAGCAATTGAATGATTCGTACCGCATCATCCTTTCGTTGTACCTGCTCGAAGGTTATGATCATCAGGAAATATCGGAAATACTTGGGATTAATTACAATGCAGTCAGAACCAAGTATTCAAGGGCCAGAAAGAAATTACTGGCAAATATCAAGCAACACCAGTTATCCGACAGCATCAACCTAAATTAA
PROTEIN sequence
Length: 279
LGKSIEILLHFCHIFSGGLAMNVLNVTGPIQKLKPEFNFTLNPFTCLCSIKSILRYLIKLTLLRLVNFFSKKCNSKKNAMSLDKNRTELSKKVHNIHDELINACLAGDQKAQFKIYNLYYKAMYNTSYRILNDQMEAEDVMQEAFLDAFQKIYQYDGSAAFGAWLKRIVINKSLDRLKKMKHDISIDEIENELIERDEEDYFEVLSMKIEAIKKGIEQLNDSYRIILSLYLLEGYDHQEISEILGINYNAVRTKYSRARKKLLANIKQHQLSDSINLN*