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08E140C01_z5_2013_Ig3399_v2_scaffold_1411_17

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_36_8

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: comp(20558..21091)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024V5_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 153
  • Evalue 1.60e-34
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 153
  • Evalue 5.00e-35
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83471.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 153
  • Evalue 2.20e-34

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Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCCTTAAAATGAAGGTAAGTGAAAAAGAAAAACTTTTTACTGATCTTTTTAGTAAGAACAAAGGGAAGATTTATCGCCTCTGTTCAGCCTACCTGATCGACAAAACAGAGGTTAACGATCTTTTTCAGGAGGTAATGATCAATGTTTGGAATAATATTGAAAAATTTCGGGGAGAATCTCAGATCAGCACCTGGGTTTATAGAATTGCGGTGAATACTGCTTTCATGTTTAATAAGAAGGCAAAAAAGAATAAAGAGCTATTCCTGCGGTTTTCGCCCGACTCCCATCCCCTGAACAACAAACCCGAGGAAACCGGAAATGAACCTTCGAACGAGATGATCAAAATACTTCACCAAACTATAAATACGCTTGCCAACCAGGATAAAATTATCATTTCTTTGGTACTGGAAGGGTTAAAATATGAAGAAATTGGTGCCATTACAGGATTGACCCTAAGTAATGTTGGTGTAAAAATCAACAGGATAAAATCTGTTTTATTAAAACGAATGAAGGAGGTGCAAAATGGATAA
PROTEIN sequence
Length: 178
MSLKMKVSEKEKLFTDLFSKNKGKIYRLCSAYLIDKTEVNDLFQEVMINVWNNIEKFRGESQISTWVYRIAVNTAFMFNKKAKKNKELFLRFSPDSHPLNNKPEETGNEPSNEMIKILHQTINTLANQDKIIISLVLEGLKYEEIGAITGLTLSNVGVKINRIKSVLLKRMKEVQNG*