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08E140C01_z5_2013_Ig3399_v2_scaffold_1972_11

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_36_8

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: 10889..11449

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGP7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 200
  • Evalue 1.20e-48
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:EAY30664.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 200
  • Evalue 1.70e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 183.0
  • Bit_score: 165
  • Evalue 1.30e-38

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Taxonomy

Microscilla marina → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGGAATCGATTTCTGACAATGCATTAATGCTAAAGGTTAAGTCGGGCGACTTAAGCAGACTTGGATTGCTATTCGAGAGATATAACAAATCGGTCTTTGGCTTCTTTTATCGAAACACTTCTAATCGGGAGATGAGTGAGGATCTGGTACAGATGCTCTTTGAGCGTATCTTAAAATACCGAACAAATTTCAGGGGTGACGGAAAGTTTACCGTTTGGATGTACAGTATAGCCCGGAATATACTGATTGATCATTACAAACAAACGAAAAAACAAGGTTTTATGAAAGAGTTGGAAGTAGCCGGAAATATTGAAATCGTCGACGAGGATTACAATCAAGAAGCTATTGATGAGAGGCATCAATTACTAATTAAGGCAATGGCCAAATTGGAAAGTGATAAACGCGAATTACTTACCCTAAGCCGTTATCAGGGATTGAAGTACAAAGAAATAGCTGAAATTATGCAGACTACAGAAGGCGCTATCAGAATTAAAATTTTCAGGGCCTTAAATGATTTAAGAATGCATTATTTAAAATTAGAAAAGATAGAAGCACAATGA
PROTEIN sequence
Length: 187
LESISDNALMLKVKSGDLSRLGLLFERYNKSVFGFFYRNTSNREMSEDLVQMLFERILKYRTNFRGDGKFTVWMYSIARNILIDHYKQTKKQGFMKELEVAGNIEIVDEDYNQEAIDERHQLLIKAMAKLESDKRELLTLSRYQGLKYKEIAEIMQTTEGAIRIKIFRALNDLRMHYLKLEKIEAQ*