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Ig3397_v2_scaffold_1233

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1233_1
unknown

Not on your lists

comp(3..338)
DNA (336bp) protein (112aa)

This feature has no annotations

Ig3397_v2_scaffold_1233_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(576..1082)
DNA (507bp) protein (169aa)
id=3910288 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1152..2012)
DNA (861bp) protein (287aa)
Flagellin domain protein id=3910207 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flagellin domain-containing protein; K02406 flagellin
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2158..2850
DNA (693bp) protein (231aa)
id=3703636 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3042..3929)
DNA (888bp) protein (296aa)
Peptidase M23 id=4026322 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3926..4954)
DNA (1029bp) protein (343aa)
id=4026321 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5209..6033
DNA (825bp) protein (275aa)
alpha/beta hydrolase fold protein id=4026320 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
alpha/beta hydrolase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6063..7349
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
SerC: seryl-tRNA synthetase id=4026319 bin=GWB1_CP_36_13 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7346..7972
DNA (627bp) protein (209aa)
Tetratricopeptide TPR_2 repeat protein id=4026318 bin=GWB1_CP_36_13 species=Brachyspira murdochii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7977..8831
DNA (855bp) protein (285aa)
argB; putative acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase id=4026317 bin=GWB1_CP_36_13 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_11
unknown

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9238..9348
DNA (111bp) protein (37aa)

This feature has no annotations

Ig3397_v2_scaffold_1233_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9424..10323)
DNA (900bp) protein (300aa)
Flagellin domain protein id=4106571 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
flagellin domain-containing protein; K02406 flagellin
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1233_13
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

10910..12007
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8H046_ACACA
hypothetical protein
Tax=RBG_13_RIF_OD1_08_40_8_curated
Ig3397_v2_scaffold_1233_14
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..12591)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6YXK4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC28706.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pallidula DSM 14239 = ACAM 615.;"
hypothetical protein
Ig3397_v2_scaffold_1233_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12602..13816)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F180_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91340.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Ig3397_v2_scaffold_1233_16
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(14241..16232)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A609_THEAQ
cell wall/surface repeat protein
Tax=RBG_16_Spirochaetes_49_21_curated
Ig3397_v2_scaffold_1233_17
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16257..17048)
DNA (792bp) protein (264aa)
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1233_18
unknown

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comp(17071..18123)
DNA (1053bp) protein (351aa)

This feature has no annotations

Ig3397_v2_scaffold_1233_19

Not on your lists

comp(18373..20436)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XIJ5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKN49241.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein rbh
Ig3397_v2_scaffold_1233_20
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(20651..21613)
DNA (963bp) protein (321aa)
YD repeat-containing protein id=3564758 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWF1_Spirochaetes_51_8_curated
Displaying 20 items

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