ggKbase home page

Ig3397_v2_scaffold_1588_6

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2992..4986

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family id=3372298 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 674.0
  • Bit_score: 427
  • Evalue 2.80e-116
  • rbh
LipL45-like lipoprotein similarity KEGG
DB: KEGG
  • Identity: 25.4
  • Coverage: 319.0
  • Bit_score: 77
  • Evalue 1.70e-11
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 674.0
  • Bit_score: 427
  • Evalue 3.90e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1995
ATGTCTAGACGAAATCTTTTAGTATGGGTTTTACTGGGTACTTTTTTATTGGTGCAATGTGATAAAAAAGAGACAGAGGCAGCCAGGCCCGATGGCAAGAGAACACAGAAAATCGCGGTGACGTTTGTGCTGGGCAAGGCTATTATCAAATCTGAGAAAGCCAATCAATGGGAGGCGATTACTGTCGGACAGCTTATCCAGCTGGCTGATGAAATAAAGGTAGACAAAAGGGGCCGGGTGGTGATGCAGTCCGAGTCTGGTTCCGTGATCACCGTCAAAGATGCGGCAGATCTAAAAATCAGTTCCCTTTTTAATCCCAAGGATAACGAAGAAGAAACTTTGATTTCACTCAATGCCGGGAAAACCGTCATCAATCCCAGGGAACTTACCGGAAAATCATCCTTTGATGTAAAGACTCCAGCCATGGTGGCGGGCGTACGGGGCACGGTTTTTACCGTGGAACATAGCGGGGGAAAATCCCGGGTCATGGTCAAGGAAGGTAAGGTCGCCGTTAGACCCCAGCTTCAGAATGAGGAATTGAGCCAGGCATTGACTCCGGTTGATGTAAATGTAGGACAACAAACGGAACTGACAGAGGAAAATGTTCAGCAAATAGAAAAAAATATTGCGCTGAATGAAGATCAAAAAGGGCAGGCTTCCGATCAAGCTGCGGCCGAAATGGTTCAGCAGGCTGTGGAGAAAGAGTTAAAAGAAGTTCTTTCAGTTCAGGAAATGAAAACCTCAGAAAAAGTGGAAATGGAGCAGGATTCCAAAGAGCTTTTGAAACTGGAAATCAACCTTAAAGCAGAAGATATTACGTCCAGCGTTGAAGGGAAAAAGCAAGTAGTTTATGGCGCCCTTAGTGTCAGTAGTTATGGCAATGAAATTTTCATCAACGGTGTTAAGGCCGCCAATGACTATTTTTCTTCCCTCTATTTGGAAGGCGAAGATCTGAATATTGAGGTGAAGCAGGGTGACCAGGTCATTATGCAAAAGAATGTCAAAGTGACTCGGGAAGGAGTAACCCTGGACTTAACTCCTCAAGATTTAAAAAACAAAGAAATGGAAAAAATTCAGGAAGGGGTCACCGCCGATCCCTATAAAATCTTGGCTGAAGGATACAAGGTAGCAGCGGATTCCATGCAGAAAGGAGAAGGATTTTTAGCCTTTCAAAGCAAGAATACTATCCGTTTGGGCAGTTTGGATAATCCCTCTCAAATAAAAACCCTGGCCAACAATCCCAGAGTGCGGCCTCTTTTAGCCGGAGGTGTGATTTTTACGAGTGATATGCAGGGAAATCTCATTGTTTGGGATCTTGCCGGAAACCGTAAAGGTCAGGTAAGTCTGGAGCAGGCCATTGACATCCCCAGCAGCATTGCTTACAATGATGGCAGAGCATTTTTGGCCAATTCCTTTGGTAAGATAGTAGGCATAGATACAGCGGGTAATTCTGTTTTAACCATGCAGATTCCCGGAGAAATCCTTTCCGGCAGTCCAATGGCTGTTTCAAAGGATAAAGTGGTAGCCTTTTCTCCTGTGTCCTTCAACGCGTATGTAATTGGAGGAGGCAAGGTCGAAAGTCAGTTTAAGTTAAATAGCCGAATTTTGCATCGTCCCGCCATTATCAGCGGCAAGTTGGTTCTTCCAGAAGCCGGTCAGATTACCGTCCGAGAGCTCTCAGGACAAGTGGTCGCCACGATTCAAGCGGCTCCTGCAGACATTTATCCCATTTCTGCCCAGGTTTTTGCAGTATTGTATGCGGATAAGACTGCACTTTATAATCTGAAAGGGCAATTACTCAATCAGCTTCCCACTTCGGTAGCTTTGGCCCTGGAGGGAAAACTGGTCTATGCCGTGGGGCAGACAATTTTTGTCAGCGAAGGCTCCCGCACAGAAAACGTTGTATTGCCTGAGAAGGTCCAGGCCCTTGCTTTGGAAAAAGGCAAGGTGGTTGCCCTCTCCGTATCGGGCAAGGTCTACCAGCTGGATATTTAA
PROTEIN sequence
Length: 665
MSRRNLLVWVLLGTFLLVQCDKKETEAARPDGKRTQKIAVTFVLGKAIIKSEKANQWEAITVGQLIQLADEIKVDKRGRVVMQSESGSVITVKDAADLKISSLFNPKDNEEETLISLNAGKTVINPRELTGKSSFDVKTPAMVAGVRGTVFTVEHSGGKSRVMVKEGKVAVRPQLQNEELSQALTPVDVNVGQQTELTEENVQQIEKNIALNEDQKGQASDQAAAEMVQQAVEKELKEVLSVQEMKTSEKVEMEQDSKELLKLEINLKAEDITSSVEGKKQVVYGALSVSSYGNEIFINGVKAANDYFSSLYLEGEDLNIEVKQGDQVIMQKNVKVTREGVTLDLTPQDLKNKEMEKIQEGVTADPYKILAEGYKVAADSMQKGEGFLAFQSKNTIRLGSLDNPSQIKTLANNPRVRPLLAGGVIFTSDMQGNLIVWDLAGNRKGQVSLEQAIDIPSSIAYNDGRAFLANSFGKIVGIDTAGNSVLTMQIPGEILSGSPMAVSKDKVVAFSPVSFNAYVIGGGKVESQFKLNSRILHRPAIISGKLVLPEAGQITVRELSGQVVATIQAAPADIYPISAQVFAVLYADKTALYNLKGQLLNQLPTSVALALEGKLVYAVGQTIFVSEGSRTENVVLPEKVQALALEKGKVVALSVSGKVYQLDI*