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SCNpilot_expt_500_bf_scaffold_1065

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1065_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..225
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=G4LMV0_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED37610.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..600
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U5AVM1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIZ38150.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1065_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

737..1843
DNA (1107bp) protein (369aa)
Uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=G4LMU8_PSEAI
hypothetical protein
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:EED37412.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1843..2949
DNA (1107bp) protein (369aa)
Helicase conserved C-terminal domain protein n=2 Tax=Gammaproteobacteria RepID=B8L2I6_9GAMM
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:EED41025.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1065_5
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3252..5090
DNA (1839bp) protein (613aa)
Phage T7 exclusion protein n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BP50_ENTAE rbh
NTPase KAP {ECO:0000313|EMBL:AJE14436.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
Phage T7 exclusion protein rbh
SCNpilot_expt_500_bf_scaffold_1065_6
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5090..5959
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 RepID=L9U6J5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE14437.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1065_7
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5956..7221
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=N4W1M6_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE14438.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1065_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7221..7964
DNA (744bp) protein (248aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
TatD-related deoxyribonuclease n=1 Tax=Pseudomonas putida CSV86 RepID=L1M7A3_PSEPU rbh
TatD-related deoxyribonuclease {ECO:0000313|EMBL:EKX87143.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
SCNpilot_expt_500_bf_scaffold_1065_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..8738
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MYB9_PSEU6 rbh
hypothetical protein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83174.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
SCNpilot_expt_500_bf_scaffold_1065_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8735..9376
DNA (642bp) protein (214aa)
Putative membrane protein n=1 Tax=Pseudomonas aeruginosa NCGM2.S1 RepID=G4LMU6_PSEAI rbh
hypothetical protein rbh
Membrane protein {ECO:0000313|EMBL:BAQ41789.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_bf_scaffold_1065_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9391..10128
DNA (738bp) protein (246aa)
Putative secreted protein n=1 Tax=Pseudomonas aeruginosa NCGM2.S1 RepID=G4LMU5_PSEAI rbh
hypothetical protein rbh
Putative secreted protein {ECO:0000313|EMBL:ABX36797.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1065_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10110..10715
DNA (606bp) protein (202aa)
Lytic transglycosylase n=1 Tax=Pseudomonas aeruginosa NCGM2.S1 RepID=G4LMU4_PSEAI rbh
lytic transglycosylase rbh
Lytic transglycosylase {ECO:0000313|EMBL:KIZ38155.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_expt_500_bf_scaffold_1065_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10712..11260
DNA (549bp) protein (183aa)
Putative secreted protein n=2 Tax=Gammaproteobacteria RepID=G4LMU3_PSEAI rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED39153.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11265..13448
DNA (2184bp) protein (728aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=F2MYB4_PSEU6 rbh
hypothetical protein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83169.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
SCNpilot_expt_500_bf_scaffold_1065_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13445..14194
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=G4LMU1_PSEAI rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED40084.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_16
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14501..15385)
DNA (885bp) protein (295aa)
Tax=DS1215_Halomonas_54_146
SCNpilot_expt_500_bf_scaffold_1065_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15648..16031
DNA (384bp) protein (128aa)
Raqprd family integrative conjugative element protein n=2 Tax=Proteobacteria RepID=U8YY03_PSEAI
hypothetical protein
RAQPRD family plasmid {ECO:0000313|EMBL:KIZ37080.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_expt_500_bf_scaffold_1065_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16028..16228
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MX63_PSEU6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ37079.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_expt_500_bf_scaffold_1065_19
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16245..16604
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A9C300_DELAS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP44620.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_500_bf_scaffold_1065_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16618..17028
DNA (411bp) protein (137aa)
TIGR03750 family conjugative transfer region protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z1X5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36805.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1065_21
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17025..17717
DNA (693bp) protein (231aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ASL7_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP44618.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_500_bf_scaffold_1065_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17714..18652
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=F2MX59_PSEU6 rbh
hypothetical protein rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83162.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
SCNpilot_expt_500_bf_scaffold_1065_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18642..20060
DNA (1419bp) protein (473aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AKP4_PSEAI rbh
hypothetical protein rbh
Putative secreted protein {ECO:0000313|EMBL:ABX36808.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1065_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20057..20461
DNA (405bp) protein (135aa)
Conjugal transfer protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AVN7_PSEAI
signal peptide
Conjugal transfer protein {ECO:0000313|EMBL:BAQ41803.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_bf_scaffold_1065_25
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20461..21741
DNA (1281bp) protein (427aa)
Conjugal transfer protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AXQ5_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED37744.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21782..23341
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=A9C306_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36810.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1065_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23384..24121
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8A3_PSEAI rbh
dsba oxidoreductase rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36811.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1065_28
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24308..24802
DNA (495bp) protein (165aa)
DNA repair protein RadC n=4 Tax=Proteobacteria RepID=A9C308_DELAS rbh
DNA repair protein RadC; K03630 DNA repair protein RadC rbh
DNA repair protein radC homolog {ECO:0000313|EMBL:CAP44612.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_500_bf_scaffold_1065_29
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..25393
DNA (447bp) protein (149aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=A9C309_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED38669.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1065_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25390..26337
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=G2UBI5_PSEAI rbh
Conjugal transfer protein {ECO:0000313|EMBL:AKE71632.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ41809.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein rbh
Displaying items 1-30 of 40 in total

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